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  • OPEN ACCESS
    Envisioning the scientific paper of the future
    FACETS • Vol. 5 • No. 1 • pp. 1 - 16
    Consider for a moment the rate of advancement in the scientific understanding of DNA. It is formidable; from Fredrich Miescher’s nuclein extraction in the 1860s to Rosalind Franklin’s double helix X-ray in the 1950s to revolutionary next-generation sequencing in the late 2000s. Now consider the scientific paper, the medium used to describe and publish these advances. How is the scientific paper advancing to meet the needs of those who generate and use scientific information? We review four essential qualities for the scientific paper of the future: (i) a robust source of trustworthy information that remains peer reviewed and is (ii) communicated to diverse users in diverse ways, (iii) open access, and (iv) has a measurable impact beyond Impact Factor. Since its inception, scientific literature has proliferated. We discuss the continuation and expansion of practices already in place including: freely accessible data and analytical code, living research and reviews, changes to peer review to improve representation of under-represented groups, plain language summaries, preprint servers, evidence-informed decision-making, and altmetrics.
  • OPEN ACCESS
    Conserving plant species at risk in Canada: land tenure, threats, and representation in federal programs
    FACETS • Vol. 5 • No. 1 • pp. 538 - 550
    Fully 37% of species listed under Canada’s Species at Risk Act (SARA) are plants or lichens. The law does not automatically protect species on private land, and it is unknown how many at-risk plants grow mainly on private land. We analyzed official status reports and related documents for 234 plant species at risk to determine land tenure and evaluated differences in threats and changes in status. We also assessed how well plants were represented in two federal programs: the Natural Areas Conservation Program (NACP) and the Habitat Stewardship Program (HSP). Of SARA-listed plant species, 35% have the majority of their known populations on private land while <10% occur mostly on federal land. Species growing mainly on private land were no more or less likely to decline in status over time compared with others. Plant species at risk were less likely than other taxonomic groups to be found on land protected under the NACP. The proportion of HSP projects targeting plants is well below the expected proportion based on the number of listed species. We recommend that policy-makers promote and prioritize actions to increase the representation of plant species in federally funded programs, especially on private lands.
  • OPEN ACCESS
    Is Fisheries and Oceans Canada policy receptive to a new Pacific salmon health perspective?
    FACETS • Vol. 4 • No. 1 • pp. 615 - 625
    The concept of health permeates priorities and policies for managing wild Pacific salmon (Oncorynchus spp.). Regulatory agencies rely largely on salmon abundance and (or) the absence of pathogens to declare if a population is healthy. Our goal was to determine if there was a receptive policy environment within Fisheries and Oceans Canada (DFO) to adopt a cumulative effects perspective of health. We used a previously developed health model along with a multiple streams framework and a narrative review of DFO policy to see how fish health was situated in DFO’s salmon management problems, policy, and politics. We discovered that a cumulative effects perspective was consistent with policy goals and priorities. DFO’s guiding principles and responsibilities for aquatic animal health were spread across multiple policies and regulations. There were no processes or people responsible for integrating information and activities. The use of the word health in policies and planning without a consistent definition meant that DFO could not explicitly assess if it has reached its management target of healthy salmon. An option for transitioning to cumulative effects perspective is to adopt a healthy public policy perspective and processes to integrate the diverse information linked to social and environmental determinants of health.
  • OPEN ACCESS
    An analysis of threats and factors that predict trends in Canadian vertebrates designated as at-risk
    FACETS • Vol. 5 • No. 1 • pp. 49 - 66
    The identification of factors that predict trends in population abundance is critical to formulate successful conservation strategies. Here, we explore population trends of Canadian vertebrates assessed as “at-risk” by the Committee on the Status of Endangered Wildlife in Canada and the threats affecting these trends using data from the Canadian Living Planet Index. We investigate how threat profiles—the combination of threats for a given species—vary among species and taxonomic groups. We then investigate threat profile as a predictor of temporal trends—both exclusively and in combination with additional biotic and abiotic factors. Species had 5.06 (±2.77) threats listed on average, and biological resource use (BRU) was the most frequently cited. Our analysis also revealed an association between taxonomic group and population trends, as measured by the proportion of annual increases (years with a positive interannual change). By contrast, the predictive power of threat profile was poor. This analysis yielded some useful insight for conservation action, particularly the prioritization of abating BRU. However, the predictive models were not as meaningful as originally anticipated. We provide recommendations on methodological improvements to advance the understanding of factors that predict trends in population abundance for prioritizing conservation action.
  • OPEN ACCESS
    A graduate student perspective on overcoming barriers to interacting with open-source software
    FACETS • Vol. 5 • No. 1 • pp. 289 - 303
    Computational methods, coding, and software are important tools for conducting research. In both academic and industry data analytics, open-source software (OSS) has gained massive popularity. Collaborative source code allows students to interact with researchers, code developers, and users from a variety of disciplines. Based on the authors’ experiences as graduate students and coding instructors, this paper provides a unique overview of the obstacles that graduate students face in obtaining the knowledge and skills required to complete their research and in transitioning from an OSS user to a contributor: psychological, practical, and cultural barriers and challenges specific to graduate students including cognitive load in graduate school, the importance of a knowledgeable mentor, seeking help from both the online and local communities, and the ongoing campaign to recognize software as research output in career and degree progression. Specific and practical steps are recommended to provide a foundation for graduate students, supervisors, administrators, and members of the OSS community to help overcome these obstacles. In conclusion, the objective of these recommendations is to describe a possible framework that individuals from across the scientific community can adapt to their needs and facilitate a sustainable feedback loop between graduate students and OSS.
  • OPEN ACCESS
    Our practice of outreach during the Ice Monitoring project in Nunavik: an early-career researcher perspective
    FACETS • Vol. 5 • No. 1 • pp. 123 - 137
    Inuit Nunangat, including Nunavik, is seeing an ever-increasing number of research projects. While mainstream approaches to research are colonial in nature and have historically contributed to the oppression of Indigenous peoples, a new paradigm is now emerging from Indigenous recommendations. Researchers are encouraged to collaborate with Inuit or Northern communities, organizations, and governments and to develop communication strategies to keep local populations informed. This paper focuses on outreach activities organized on several occasions throughout the Ice Monitoring project, in which we participated as PhD students. We share details on this periodic outreach program, which included a Facebook page, hosting an information table at the Co-op store, activities with high school classes, and participation in Raglan Mine’s Environmental Forum. We also discuss lessons learned and the transformation of our practice.
  • OPEN ACCESS
    Are we accurately estimating the potential role of pollution in the decline of species at risk in Canada?
    FACETS • Vol. 4 • No. 1 • pp. 598 - 614
    Pollution is a pervasive, albeit often invisible, threat to biodiversity in Canada. Currently, the Committee on the Status of Endangered Wildlife in Canada (COSEWIC) relies on expert opinion to assess the scope (i.e., the proportion of a species’ population that may be affected) of pollution to species at risk. Here, we describe a spatially explicit, quantitative method for assessing the scope of pollution as a threat to species at risk in Canada. Using this method, we quantified the geographic co-occurrence of 488 terrestrial and freshwater species and pollution sources and determined that, on average, 57% of the mapped occurrences of each species at risk co-occurred with at least one pollution source. Furthermore, we found a weak correlation between the scope of the threat of pollution as assessed by COSEWIC expert panels and the geographic overlap of species occurrences and pollution sources that we determined with our quantitative method. Experts frequently identified scope of pollution as absent or negligible even for species with extensive co-occurrence with pollution sources, especially vascular plants. Clearly, a quantitative approach is needed to make accurate estimates of the scope of pollution as a threat to species at risk in Canada.
  • OPEN ACCESS
    Enacting workplace culture change for excellence in research: a gender lens
    FACETS • Vol. 5 • No. 1 • pp. 228 - 233
    Science and engineering research excellence can be maximized if the selection of researchers is made from 100% of the pool of human talent. This requires policies and approaches that encourage broad sections of society, including women and other underrepresented groups, to participate in research. Institutional policies, interpersonal interactions, and individuals’ attitudes are drivers of workplace culture. Here, some new evidence-based and systematic approaches with a focus on culture are proposed to foster women’s inclusion and success in science and engineering.
  • OPEN ACCESS
    Synthesizing and communicating climate change impacts to inform coastal adaptation planning
    FACETS • Vol. 5 • No. 1 • pp. 704 - 737
    Planning for adaptation to climate change requires regionally relevant information on rising air and ocean temperatures, sea levels, increasingly frequent and intense storms, and other climate-related impacts. However, in many regions there are limited focused syntheses of the climate impacts, risks, and potential adaptation strategies for coastal marine areas and sectors. We report on a regional assessment of climate change impacts and recommendations for adaptation strategies in the NE Pacific Coast (British Columbia, Canada), conducted in collaboration with a regional planning and plan implementation partnership (Marine Plan Partnership for the North Pacific Coast), aimed at bridging the gaps between climate science and regional adaptation planning. We incorporated both social and ecological aspects of climate change impacts and adaptations, and the feedback mechanisms which may result in both increased risks and opportunities for the following areas of interest: “Ecosystems”, “Fisheries and Aquaculture”, “Communities”, and “Marine Infrastructure”. As next steps within the region, we propose proactive planning measures including communication of the key impacts and projections and cross-sectoral assessments of climate vulnerability and risk to direct decision-making.
  • OPEN ACCESS
    Tracking insect outbreaks: a case study of community-assisted moth monitoring using sex pheromone traps
    FACETS • Vol. 5 • No. 1 • pp. 91 - 104
    Insect outbreaks can cover vast geographic areas making it onerous to cost-effectively monitor populations to address management or ecological questions. Community science (or citizen science), which entails engaging the public to assist with data collection, provides a possible solution to this challenge for the spruce budworm (Choristoneura fumiferana Clemens), a major defoliating pest in North America. Here, we lay out the Budworm Tracker Program, a contributory community science program developed to help monitor spruce budworm moths throughout eastern Canada. The program outsources free pheromone trap kits to volunteers who periodically check and collect moths from their traps throughout the budworm flight period, then return them in a prepaid envelope to the organizers. Over three years, the program engaged an average of 216–375 volunteers and yielded a data return rate of 68%–89%, for a total of 16 311–54 525 moths per year. Volunteer retention among years was 71%–89%. Data from this program offer compelling evidence for the range of long-distance moth dispersal. Although our program was designed for spruce budworm, this template could easily be adapted for forestry, urban forestry, and agricultural systems to monitor any of the numerous organisms for which there is an established trapping method.
  • OPEN ACCESS
    Perspectives for early-career researchers on plagiarism and scientific integrity
    FACETS • Vol. 5 • No. 1 • pp. 17 - 25
    Lapses in scientific integrity, such as plagiarism, persist in the scientific realm. To be successful and contributory, early-career researchers (ECRs), including graduate students, need to be able to effectively navigate the literature, peer-review process, and scientific research with integrity. Here we discuss different aspects of scientific integrity related to ECRs. Our discussion centres on the concepts of plagiarism and intellectual property, predatory journals, aspects of peer review, transparency in publishing, and false advanced accreditations. Negative elements within these topics may be especially damaging to ECRs, who may be less familiar with the research landscape. We highlight the need for ECRs to approach scientific investigation cautiously and thoughtfully to promote integrity through critical thinking.
  • OPEN ACCESS
    Differing marine animal biomass shifts under 21st century climate change between Canada’s three oceans
    FACETS • Vol. 5 • No. 1 • pp. 105 - 122
    Under climate change, species composition and abundances in high-latitude waters are expected to substantially reconfigure with consequences for trophic relationships and ecosystem services. Outcomes are challenging to project at national scales, despite their importance for management decisions. Using an ensemble of six global marine ecosystem models we analyzed marine ecosystem responses to climate change from 1971 to 2099 in Canada’s Exclusive Economic Zone (EEZ) under four standardized emissions scenarios. By 2099, under business-as-usual emissions (RCP8.5) projected marine animal biomass declined by an average of −7.7% (±29.5%) within the Canadian EEZ, dominated by declines in the Pacific (−24% ± 24.5%) and Atlantic (−25.5% ± 9.5%) areas; these were partially compensated by increases in the Canadian Arctic (+26.2% ± 38.4%). Lower emissions scenarios projected successively smaller biomass changes, highlighting the benefits of stronger mitigation targets. Individual model projections were most consistent in the Atlantic and Pacific, but highly variable in the Arctic due to model uncertainties in polar regions. Different trajectories of future marine biomass changes will require regional-specific responses in conservation and management strategies, such as adaptive planning of marine protected areas and species-specific management plans, to enhance resilience and rebuilding of Canada’s marine ecosystems and commercial fish stocks.
  • OPEN ACCESS
    Threshold concepts and sustainability: features of a contested paradigm
    FACETS • Vol. 5 • No. 1 • pp. 182 - 199
    Threshold concepts describe the core concepts that people must master if they are to effectively think from within a new discipline or paradigm. Here, I discuss threshold concepts relevant to the science and practice of sustainability, unpacking the persistent challenges and critiques that sustainability has faced over the decades. Sustainability is immensely popular, but also endlessly critiqued as being naïve, vague, and easy to co-opt. I argue that these challenges can be traced to sustainability’s status as a robust, alternative world view to the industrial, neoliberal paradigm. The threshold concepts discussed below are troublesome, and new learners face significant challenges when trying to learn them and move into the paradigm. Here, I review five threshold concepts that are widely discussed as important to sustainability: complexity, collaborative institutions, multiple ways of knowing, no panaceas, and adaptability. This list is not intended as comprehensive but exemplary of sustainability as a pluralistic paradigm. Recognizing the special status of these and other threshold concepts within sustainability, and the linkages and dependencies among them, is an important advance for sustainability education and practice. I also offer some suggestions on classroom activities that have proved effective in helping people through the process of learning these concepts.
  • OPEN ACCESS
    Indigenous knowledge and federal environmental assessments in Canada: applying past lessons to the 2019 impact assessment act
    FACETS • Vol. 5 • No. 1 • pp. 67 - 90
    Policy-makers ideally pursue well-informed, socially just means to make environmental decisions. Indigenous peoples have used Indigenous knowledge (IK) to inform decisions about environmental management for millennia. In the last 50 years, many western societies have used environmental assessment (EA) processes to deliberate on industrial proposals, informed by scientific information. Recently EA processes have attempted to incorporate IK in some countries and regions, but practitioners and scholars have criticized the ability of EA to meaningfully engage IK. Here we consider these tensions in Canada, a country with economic focus on resource extraction and unresolved government-to-government relationships with Indigenous Nations. In 2019, the Canadian government passed the Impact Assessment Act, reinvigorating dialogue on the relationship between IK and EA. Addressing this opportunity, we examined obstacles between IK and EA via a systematic literature review, and qualitative analyses of publications and the Act itself. Our results and synthesis identify obstacles preventing the Act from meaningfully engaging IK, some of which are surmountable (e.g., failures to engage best practices, financial limitations), whereas others are substantial (e.g., knowledge incompatibilities, effects of colonization). Finally, we offer recommendations for practitioners and scholars towards ameliorating relationships between IK and EA towards improved decision-making and recognition of Indigenous rights.
  • OPEN ACCESS
    Ecological research should consider Indigenous peoples and stewardship
    FACETS • Vol. 5 • No. 1 • pp. 534 - 537
    The relationship between Indigenous peoples and the functioning of terrestrial ecosystems has received increased attention in recent years. As a result, it is becoming more critical for researchers focusing on terrestrial ecosystems to work with Indigenous groups to gain a better understanding of how past and current stewardship of these lands may influence results. As a case study to explore these ideas, we systematically reviewed articles from 2008 to 2018 where research was conducted in North America, South America, and Oceania. Of the 159 articles included, 11 included acknowledgement of Indigenous stewardship, acknowledged the Indigenous Territories or lands, or named the Indigenous group on whose Territory the research was conducted. Within the scope of this case study, our results demonstrate an overall lack of Indigenous acknowledgement or consideration within the scope of our review. Given the recent advancements in our understanding of how Indigenous groups have shaped their lands, we implore researchers to consider collaboration among local Indigenous groups as to better cultivate relationships and foster a greater understanding of their ecosystems.
  • OPEN ACCESS
    A first assessment of microplastics and other anthropogenic particles in Hudson Bay and the surrounding eastern Canadian Arctic waters of Nunavut
    FACETS • Vol. 5 • No. 1 • pp. 432 - 454
    Microplastics are a globally ubiquitous contaminant, invading the most remote regions, including the Arctic. To date, our understanding of the distribution and sources of microplastics in the Arctic is limited but growing. This study aims to advance our understanding of microplastics in the Arctic. Surface water, zooplankton, sediment, and snow samples were collected from Hudson Bay to north Baffin Bay onboard the CCGS Amundsen from July to August 2017. Samples were examined for microplastics, which were chemically identified via Raman spectroscopy for surface water and zooplankton and Fourier transform infrared spectroscopy for sediment. We found that 90% of surface water and zooplankton samples, and 85% of sediment samples, contained microplastics or other anthropogenic particles. Mean anthropogenic particle concentrations, which includes microplastics, were 0.22 ± 0.23 (per litre) for surface water, 3.51 ± 4.00 (per gram) for zooplankton, and 1.94 ± 4.12 (per gram) for sediment. These concentrations were not related to the human populations upstream, suggesting that microplastic contamination in the Arctic is from long-range transport. Overall, this study highlights the presence of microplastics across the eastern Canadian Arctic, in multiple media, and offers evidence of long-range transport via ocean and atmospheric currents. Further research is needed to better understand sources, distribution, and effects to Arctic ecosystems.
  • OPEN ACCESS
    Diverse perspectives on interdisciplinarity from Members of the College of the Royal Society of Canada
    FACETS • Vol. 5 • No. 1 • pp. 138 - 165
    Various multiple-disciplinary terms and concepts (although most commonly “interdisciplinarity,” which is used herein) are used to frame education, scholarship, research, and interactions within and outside academia. In principle, the premise of interdisciplinarity may appear to have many strengths; yet, the extent to which interdisciplinarity is embraced by the current generation of academics, the benefits and risks for doing so, and the barriers and facilitators to achieving interdisciplinarity, represent inherent challenges. Much has been written on the topic of interdisciplinarity, but to our knowledge there have been few attempts to consider and present diverse perspectives from scholars, artists, and scientists in a cohesive manner. As a team of 57 members from the Canadian College of New Scholars, Artists, and Scientists of the Royal Society of Canada (the College) who self-identify as being engaged or interested in interdisciplinarity, we provide diverse intellectual, cultural, and social perspectives. The goal of this paper is to share our collective wisdom on this topic with the broader community and to stimulate discourse and debate on the merits and challenges associated with interdisciplinarity. Perhaps the clearest message emerging from this exercise is that working across established boundaries of scholarly communities is rewarding, necessary, and is more likely to result in impact. However, there are barriers that limit the ease with which this can occur (e.g., lack of institutional structures and funding to facilitate cross-disciplinary exploration). Occasionally, there can be significant risk associated with doing interdisciplinary work (e.g., lack of adequate measurement or recognition of work by disciplinary peers). Solving many of the world’s complex and pressing problems (e.g., climate change, sustainable agriculture, the burden of chronic disease, and aging populations) demands thinking and working across long-standing, but in some ways restrictive, academic boundaries. Academic institutions and key support structures, especially funding bodies, will play an important role in helping to realize what is readily apparent to all who contributed to this paper—that interdisciplinarity is essential for solving complex problems; it is the new norm. Failure to empower and encourage those doing this research will serve as a great impediment to training, knowledge, and addressing societal issues.
  • OPEN ACCESS
    A turtle population study in an isolated urban wetland complex in Ontario reveals a few surprises
    FACETS • Vol. 4 • No. 1 • pp. 584 - 597
    We report on the results of the first mark–recapture survey of freshwater turtles in an isolated urban wetland complex in one of Canada’s fastest growing municipalities. Although we found turtles in every surveyed wetland, the density and assemblage of turtles in smaller wetlands were significantly different than in larger wetland bodies. We also documented two species of turtles that were thought to be absent from this wetland complex, the Northern Map turtle and Eastern Musk turtle. We noted that a wetland that was bisected by a high-traffic road showed a male-skewed sex ratio in the population of Midland Painted turtles but not in the population of Eastern Snapping turtles. As a whole, the sex ratios inside the wetland complex were not skewed. These results reinforce the conclusions of a previous study of a single wetland within this same complex that had found a correlation between road mortality and a male-skewed sex ratio in Midland painted turtles. We discuss population sources and sinks within the complex and the importance of protecting the overland corridors that support the safe turtle movements within this provincially significant wetland complex.
  • OPEN ACCESS
    How to rescue Ontario’s Endangered Species Act: a biologist’s perspective
    FACETS • Vol. 5 • No. 1 • pp. 423 - 431
  • OPEN ACCESS
    Peer-reviewed scientific contributions from Canadian zoos and aquariums
    FACETS • Vol. 5 • No. 1 • pp. 381 - 392
    With the widespread loss of biodiversity, zoos and aquariums are striving to become leaders in biodiversity conservation and research. Canada’s Accredited Zoos and Aquariums (CAZA) is a nonprofit organization created to represent its members, including as agencies of conservation and science. However, the contribution of CAZA members to conservation and science has not been quantified. We used research productivity in the form of peer-reviewed publications to systematically quantify biodiversity conservation engagement by CAZA institutions. We extracted publications from the ISI Web of Science database and found that the annual number of publications increased over time. CAZA members published most in the area of veterinary science, with few publications in biodiversity conservation. Organization age, research-orientated mission statements, and financial assets were significant predictors of research productivity. CAZA institutions also published significantly less (X¯ = 12.5 ± 5.52 SE) than members of the Association of Zoos and Aquariums (X¯ = 24.27 ± 5.08 SE), based in the United States. Zoos and aquariums are important resources in mitigating biodiversity loss, and are increasing their research output in this area. Nonetheless, only a small proportion of publications were in biodiversity conservation, and the majority of all publications occurred in zoo-centric journals.