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  • OPEN ACCESS
    Host–parasite transcriptomics during immunostimulant-enhanced rejection of salmon lice (Lepeophtheirus salmonis) by Atlantic salmon (Salmo salar)
    FACETS • Vol. 2 • pp. 477 - 495
    Salmon lice (Lepeophtheirus salmonis) are important ectoparasites of wild and farmed salmonids and cause major losses to the salmon farming industry throughout the Northern Hemisphere. With the emergence of resistance to several commonly used parasiticides, novel control strategies and integration of multiple treatment options are needed, including host immunostimulation. Here, we investigate the effects of a functional feed containing a peptidoglycan and nucleotide formulation on L. salmonis infection of Atlantic salmon (Salmo salar) by characterizing lice infection levels, the expression of several host immune genes, and the parasite transcriptomic response to the immunostimulated host. Although initial infection intensities were low, the low dose (LD) immunostimulant diet reduced the total lice burden by 50% relative to controls. Immunostimulant fed hosts up-regulated interleukin-1β in the skin and spleen. This gene has been implicated in successful responses of several salmonid species to salmon lice but is typically not observed in Atlantic salmon, suggesting a favorable influence on the immune response. Lice infecting LD immunostimulated salmon overexpressed genes putatively involved in parasite immunity, including carboxylesterases, and underexpressed genes putatively involved in feeding (e.g., proteases). These lice response genes further improve the characterization of the transcriptome of the non-model parasite by identifying genes potentially involved in evading host immunity.
  • OPEN ACCESS
    Using a linked table-based structure to encode self-describing multiparameter spatiotemporal data
    FACETS • Vol. 3 • No. 1 • pp. 326 - 337
    Multiparameter data with both spatial and temporal components are critical to advancing the state of environmental science. These data and data collected in the future are most useful when compared with each other and analyzed together, which is often inhibited by inconsistent data formats and a lack of structured documentation provided by researchers and (or) data repositories. In this paper we describe a linked table-based structure that encodes multiparameter spatiotemporal data and their documentation that is both flexible (able to store a wide variety of data sets) and usable (can easily be viewed, edited, and converted to plottable formats). The format is a collection of five tables (Data, Locations, Params, Data Sets, and Columns), on which restrictions are placed to ensure data are represented consistently from multiple sources. These tables can be stored in a variety of ways including spreadsheet files, comma-separated value (CSV) files, JavaScript object notation (JSON) files, databases, or objects in a software environment such as R or Python. A toolkit for users of R statistical software was also developed to facilitate converting data to and from the data format. We have used this format to combine data from multiple sources with minimal metadata loss and to effectively archive and communicate the results of spatiotemporal studies. We believe that this format and associated discussion of data and data storage will facilitate increased synergies between past, present, and future data sets in the environmental science community.
  • OPEN ACCESS
    Increased size and relative abundance of migratory fishes observed near the Athabasca oil sands
    FACETS • Vol. 2 • pp. 833 - 858
    Responses to chemical and physical stressors are commonly expected among organisms residing near the Athabasca oil sands. Physiological effects have been observed in fishes during field studies; but further effects associated with development are not clear or consistent among species. For instance, data from a fish fence in 2009 show declines in the relative abundances of some species, including Arctic grayling (Thymallus arcticus). In contrast, increases were seen in white sucker (Catostomus commersoni). This divergence suggests incomplete understanding of the status of fishes residing near the oil sands. However, an important challenge limiting understanding is the lack of reliable baseline or reference data. To overcome this challenge, we used iterative normal ranges and a historical data set (electrofishing surveys done from 1987 to 2014) to determine if changes have occurred in fishes captured in the lower Athabasca River. These analyses revealed clear increases in the lengths of white sucker and walleye (Sander vitreus) and their relative abundances during the spawning season. The occurrence of these changes may be associated with overwintering location, but reduced fishing pressure in Lake Athabasca, eutrophication, or a cumulative effect may explain the form of changes detected in this study.
  • OPEN ACCESS
    DIY meteorology: Use of citizen science to monitor snow dynamics in a data-sparse city
    FACETS • Vol. 2 • pp. 734 - 753
    Cities are under pressure to operate their services effectively and project costs of operations across various timeframes. In high-latitude and high-altitude urban centers, snow management is one of the larger unknowns and has both operational and budgetary limitations. Snowfall and snow depth observations within urban environments are important to plan snow clearing and prepare for the effects of spring runoff on cities’ drainage systems. In-house research functions are expensive, but one way to overcome that expense and still produce effective data is through citizen science. In this paper, we examine the potential to use citizen science for snowfall data collection in urban environments. A group of volunteers measured daily snowfall and snow depth at an urban site in Saskatoon (Canada) during two winters. Reliability was assessed with a statistical consistency analysis and a comparison with other data sets collected around Saskatoon. We found that citizen-science-derived data were more reliable and relevant for many urban management stakeholders. Feedback from the participants demonstrated reflexivity about social learning and a renewed sense of community built around generating reliable and useful data. We conclude that citizen science holds great potential to improve data provision for effective and sustainable city planning and greater social learning benefits overall.
  • OPEN ACCESS
    Knowledge sharing about deep-sea ecosystems to inform conservation and research decisions
    FACETS • Vol. 2 • pp. 984 - 997
    The Marianas Trench Marine National Monument (MNM) currently extends policy-based protection to deep-sea ecosystems contained within it, but managers require better understanding of the current knowledge and knowledge gaps about these ecosystems to guide decision-making. To address this need, we present a case study of the Marianas Trench MNM using in-depth interviews to determine scientists’ (1) current understanding of anthropogenic drivers of change and system vulnerability in deep-sea ecosystems; and (2) perceptions of the least understood deep-sea ecosystems and processes in the Marianas Trench MNM, and which of these, if any, should be research priorities to fill knowledge gaps about these systems and the impacts from anthropogenic drivers of change. Interview respondents shared similar views on the current knowledge of deep-sea ecosystems and potential anthropogenic drivers of change in the Marianas Trench MNM. Respondents also identified trench and deep pelagic (bathyal, abyssal, and hadal zones) ecosystems as the least understood, and highlighted climate change, litter and waste, mining and fishing, and interactions between these drivers of change as critical knowledge gaps. To fill key knowledge gaps and inform conservation decision-making, respondents identified the need for monitoring networks and time-series data. Our approach demonstrates how in-depth interviews can be used to elicit knowledge to inform decision-making in data-limited situations.
  • OPEN ACCESS
    Impacts of hypoxia on estuarine macroinvertebrate assemblages across a regional nutrient gradient
    FACETS • Vol. 3 • No. 1 • pp. 23 - 44
    In this study, we examined the effects of dissolved oxygen, via metrics based on hourly measurements, and other environmental variables on invertebrate assemblages in estuaries spanning a gradient of nutrient loading and geography in the southern Gulf of St. Lawrence, Canada. Upper areas (15–25 practical salinity units (PSU)) of 13 estuaries that were dominated by either seagrass (Zostera marina Linnaeus, 1753) or macroalgae (Ulva spp. Linnaeus, 1753) were sampled from June to September 2013. Macroinvertebrate assemblages from Z. marina were found to be distinct from Ulva assemblages for both epifauna and infauna. Small snails dominated each vegetation type, specifically cerithids in Z. marina and hydrobids in Ulva. Although Z. marina had higher species richness, approximately 70% of species were common to both habitats. Faunal communities differed among estuaries with large, within-estuary, temporal variance only observed at Ulva sites impacted by hypoxia and particularly at sites with long water residence time. Indeed, abundances varied by several orders of magnitude in Ulva ranging from zero to thousands of macroinvertebrates. There was a strong negative correlation between hypoxic or anoxic water, 48 h prior to sampling, with relative abundances of amphipods, and a positive correlation with the relative abundances of snails. As one of the first studies to use high-frequency oxygen monitoring, this study revealed probable impacts and the transient nature of hypoxia in eutrophication.
  • OPEN ACCESS
    Underwater optical environment in the coastal waters of British Columbia, Canada
    FACETS • Vol. 2 • pp. 872 - 891
    We describe the underwater light field of the Strait of Georgia in spring and summer, using apparent optical properties (reflectance, attenuation coefficient of downwelling irradiance, the average cosine of downwelling irradiance, and the attenuation of scalar irradiance). Both the attenuation and reflectance of photosynthetically available radiation (PAR; 400–700 nm) are highest in the turbid waters of the Fraser River plume, due to scattering by mainly inorganic particles and absorption by coloured dissolved organic matter, phytoplankton, and other organic particles. Light is most diffuse in the surface waters of the plume and least diffuse at depth and away from the plume. Throughout the Strait, blue and red wavelengths are attenuated most rapidly resulting in a green peak of reflectance, the portion of the electromagnetic spectrum that penetrates the most deeply. PAR is attenuated to 1% of its surface intensity within 6–22 m in the spring and 4–23 m in the summer. For red and blue light, the depth of 1% penetration is never deeper than 9 m. All of the visible radiation, with the exception of some green light, is absorbed within the outflowing layer (15–30 m) that is exported from the Strait with the estuarine circulation. The rapid extinction of light helps to explain the very shallow distribution of phytoplankton.
  • OPEN ACCESS
    The effect of global climate change on the future distribution of economically important macroalgae (seaweeds) in the northwest Atlantic
    FACETS • Vol. 3 • No. 1 • pp. 275 - 286
    An increase in greenhouse gas emissions has led to a rise in average global air and ocean temperatures. Increased sea surface temperatures can cause changes in species’ distributions, particularly those species close to their thermal tolerance limits. We use a bioclimate envelope approach to assess potential shifts in the range of marine macroalgae harvested in North American waters: rockweed (Fucus vesiculosus Linnaeus, 1753), serrated wrack (Fucus serratus Linnaeus, 1753), knotted wrack (Ascophyllum nodosum (Linnaeus) Le Jolis, 1863), carrageen moss (Chondrus crispus Stackhouse, 1797), and three kelp species (Laminaria digitata (Hudson) J.V. Lamouroux, 1813; Saccharina latissima (Linnaeus) C.E. Lane, C. Mayes, Druehl et G.W. Saunders, 2006; and Saccharina longicruris (Bachelot de la Pylaie) Kuntze, 1891). We determined species’ thermal limits from the current sea surface temperatures associated with their geographical distributions. Future distributions were based on sea surface temperatures projected for the year ∼2100 by four atmosphere-ocean general circulation models and earth system models for regional concentration pathways (RCPs) 4.5 and 8.5. Future distributions based on RCP 8.5 indicate that the presence of all but rockweed (F. vesiculosus) is likely to be threatened by warming waters in the Gulf of St. Lawrence and along the Atlantic coast of Nova Scotia. Range retractions of macroalgae will have significant ecological and economic effects including impacts on commercial fisheries and harvest rates and losses of floral and faunal biodiversity and production, and should be considered in the designation of marine protected areas.
  • OPEN ACCESS
    A critique of Hubbert’s model for peak oil
    FACETS • Vol. 3 • No. 1 • pp. 260 - 274
    In 1956, Shell Oil Company geologist M. King Hubbert published a model for the growth and decline over time of the production rates of oil extracted from the land mass of the continental US. Employing an estimate for the amount of ultimately recoverable oil and a logistic curve for the oil production rate, he accurately predicted a peak in US oil production for 1970. His arguments and the success of his prediction have been much celebrated, and the original paper has 1400 publication citations to date. The theory of “peak oil” (and subsequently, of natural resource scarcity in general) has consequently become associated with Hubbert and “Hubbert” curves and models. However, his prediction for the timing of a world peak oil production rate and the subsequent predictions of many others have proven inaccurate. We revisit the Hubbert model for oil extraction and provide an analysis of it and several variants in the language of (time) autonomous differential equations.
  • OPEN ACCESS
    Diversity in geoscience: Participation, behaviour, and the division of scientific labour at a Canadian geoscience conference
    FACETS • Vol. 3 • No. 1 • pp. 415 - 440
    Effective policies promoting diversity in geoscience require understanding of how the values and practices of the community support the inclusion of different social groups. As sites of knowledge exchange and professional development, academic conferences are important culturing institutions that can alleviate or reproduce barriers to diversity in geoscience. This study examines diversity at a 2017 geoscience conference, the joint Canadian Geophysical Union and Canadian Society of Agricultural and Forest Meteorology annual meeting, through observation of participation, presentation content, and behaviour in conference sessions. Across 256 observed presentations, women constituted 28% of speakers, whereas women of colour made up only 5%. Participation rates differed between disciplinary sections, with the most populous sessions (Hydrology and Earth Surface) having the lowest percentage of women. Examination of presentation content reveals that the methods and scholarly contributions of both women and people of colour differed from the majority, suggesting an intellectual division of labour in geoscience. Examination of audience behaviours between presenters reveals how a “chilly climate” can be experienced by women and other marginalized demographics in conferences. We argue that there is more to be done than simply increasing numbers of women or other minorities in geoscientific spaces, and we suggest pathways to making geoscience a more inclusive and democratic pursuit.
  • OPEN ACCESS
    A comparison of infectious agents between hatchery-enhanced and wild out-migrating juvenile chinook salmon (Oncorhynchus tshawytscha) from Cowichan River, British Columbia
    FACETS • Vol. 3 • No. 1 • pp. 695 - 721
    Infectious diseases are likely contributing to large-scale declines in chinook salmon stocks in the Pacific Northwest, but the specific agents and diseases involved, and the prevalences in migratory salmon, are mostly unknown. We applied a high-throughput microfluidics platform to screen for 45 infectious agents in 556 out-migrating juvenile chinook salmon, collected from freshwater (FW) and saltwater (SW) locations in the Cowichan River system on Vancouver Island, Canada, during 2014. Nineteen agents (5 bacterial, 2 viral, and 12 parasitic) were detected, with prevalences ranging from 0.2% to 57.6%. Co-infections between Candidatus Branchiomonas cysticola Toenshoff, Kvellestad, Mitchell, Steinum, Falk, Colquhoun & Horn, 2012, Paranucleospora theridion Nylund, Nylund, Watanabe, Arnesen & Kalrsbakk, 2010, and gill chlamydia, all associated with gill disease, were observed in SW samples. We detected agents known to cause large-scale mortalities in Pacific salmon (Ceratonova shasta (Noble, 1950), Parvicapsula minibicornis Kent, Whitaker & Dawe, 1977), and agents only recently reported in Pacific salmon in BC (Ca. B. cysticola, P. theridion, Facilispora margolisi Jones, Prosperi-Porta & Kim, 2012 and Parvicapsula pseudobranchicola Karlsbakk, Saether, Hostlund, Fjellsoy & Nylund, 2002). Wild and hatchery fish were most divergent in agent profiles in FW, with higher agent diversity in wild fish. Differences in prevalence largely dissipated once they converged in the marine environment, although hatchery fish may be infected by a greater diversity of agents sooner after ocean entry by virtue of their more rapid migration from nearshore to offshore environments.
  • OPEN ACCESS
    Nickel geochemistry of oil sands fluid petroleum coke deposits, Alberta, Canada
    FACETS • Vol. 3 • No. 1 • pp. 469 - 486
    Nickel (Ni) leaching from oil sands petroleum coke can have toxicological effects on aquatic organisms. However, geochemical controls on Ni release, transport, and attenuation within coke deposits remains limited. We examined the geochemistry of fluid coke and associated pore waters from two deposits at an oil sands mine near Fort McMurray, Alberta, Canada. Synchrotron-based micro-X-ray fluorescence (μXRF) and micro-X-ray absorption near edge structure (μXANES) spectroscopy show that Ni(II)-porphyrin complexes dominate, but inorganic phases including Ni(II)-sulfide and Ni(II)-oxide comprise a minor component of fluid coke. Sequential chemical extractions suggested that sorption–desorption reactions may influence Ni mobility within fluid coke deposits. Although only a small proportion of total Ni (<4%) is susceptible to leaching under environmentally relevant concentrations, dissolved Ni concentrations (n = 65) range from 2 to 120 μg·L−1 (median 7.8 μg·L−1) within the two deposits and generally decrease with depth below the water table. Pore water Ni concentrations are negatively correlated with pH, but not with dissolved sulfate, bicarbonate, or chloride. Overall, our findings suggest that pore water pH and sorption–desorption reactions are principal controls on dissolved Ni concentrations within oil sands fluid petroleum coke deposits.
  • OPEN ACCESS
    Exaggerated expectations in ancient starch research and the need for new taphonomic and authenticity criteria
    FACETS • Vol. 3 • No. 1 • pp. 777 - 798
    Ancient starch research illuminates aspects of human ecology and economic botany that drove human evolution and cultural complexity over time, with a special emphasis on past technology, diet, health, and adaptation to changing environments and socio-economic systems. However, lapses in prevailing starch research demonstrate the exaggerated expectations for the field that have been generated over the last few decades. This includes an absence of explanation for the millennial-scale survivability of a biochemically degradable polymer, and difficulties in establishing authenticity and taxonomic identification. This paper outlines new taphonomic and authenticity criteria to guide future work toward designing research programs that fully exploit the potential of ancient starch while considering growing demands from readers, editors, and reviewers that look for objective compositional identification of putatively ancient starch granules.
  • OPEN ACCESS
    The same strain of Piscine orthoreovirus (PRV-1) is involved in the development of different, but related, diseases in Atlantic and Pacific Salmon in British Columbia
    FACETS • Vol. 3 • No. 1 • pp. 599 - 641
    Piscine orthoreovirus Strain PRV-1 is the causative agent of heart and skeletal muscle inflammation (HSMI) in Atlantic salmon (Salmo salar Linnaeus, 1758). Given its high prevalence in net pen salmon, debate has arisen on whether PRV poses a risk to migratory salmon, especially in British Columbia (BC) where commercially important wild Pacific salmon are in decline. Various strains of PRV have been associated with diseases in Pacific salmon, including erythrocytic inclusion body syndrome (EIBS), HSMI-like disease, and jaundice/anemia in Japan, Norway, Chile and Canada. We examined the developmental pathway of HSMI and jaundice/anemia associated with PRV-1 in farmed Atlantic and chinook (Oncorhynchus tshawytscha (Walbaum, 1792)) salmon in BC, respectively. In situ hybridization localized PRV-1 within developing lesions in both diseases. The two diseases showed dissimilar pathological pathways, with inflammatory lesions in heart and skeletal muscle in Atlantic salmon and degenerative-necrotic lesions in kidney and liver in chinook salmon, plausibly explained by differences in PRV load tolerance in red blood cells. Viral genome sequencing revealed no consistent differences in PRV-1 variants intimately involved in the development of both diseases suggesting that migratory chinook salmon may be at more than a minimal risk of disease from exposure to the high levels of PRV occurring in salmon farms.
  • OPEN ACCESS
    Shining light on recent advances in microbial mercury cycling
    FACETS • Vol. 3 • No. 1 • pp. 858 - 879
    Mercury (Hg) is a global pollutant emitted primarily as gaseous Hg0 that is deposited in aquatic and terrestrial ecosystems following its oxidation to HgII. From that point, microbes play a key role in determining Hg’s fate in the environment by participating in sequestration, oxidation, reduction, and methylation reactions. A wide diversity of chemotrophic and phototrophic microbes occupying oxic and anoxic habitats are known to participate directly in Hg cycling. Over the last few years, new findings have come to light that have greatly improved our mechanistic understanding of microbe-mediated Hg cycling pathways in the environment. In this review, we summarize recent advances in microbially mediated Hg cycling and take the opportunity to compare the relatively well-studied chemotrophic pathways to poorly understood phototrophic pathways. We present how the use of genomic and analytical tools can be used to understand Hg transformations and the physiological context of recently discovered cometabolic Hg transformations supported in anaerobes and phototrophs. Finally, we propose a conceptual framework that emphasizes the role that phototrophs play in environmental Hg redox cycling and the importance of better characterizing such pathways in the face of the environmental changes currently underway.
  • OPEN ACCESS
    Age matters: Submersion period shapes community composition of lake biofilms under glyphosate stress
    FACETS • Vol. 3 • No. 1 • pp. 934 - 951
    The phosphonate herbicide glyphosate, which is the active ingredient in the commercial formulation Roundup®, is currently the most globally used herbicide. In aquatic ecosystems, periphytic biofilms, or periphyton, are at the base of food webs and are often the first communities to be in direct contact with runoff. Microcosm experiments were conducted to assess the effects of a pulse exposure of glyphosate on community composition and chlorophyll a concentrations of lake biofilms at different colonization stages (2 months, 1 year, and 20 years). This is the first study that uses such contrasting submersion periods. Biofilms were exposed to either environmental levels of pure analytical grade glyphosate (6 μg/L, 65 μg/L, and 600 μg/L) or to corresponding phosphorus concentrations. Community composition was determined by deep sequencing of the 18S and 16S rRNA genes to target eukaryotes and cyanobacteria, respectively. The results showed that submersion period was the only significant contributor to community structure. However, at the taxon level, the potentially toxic genus Anabaena was found to increase in relative abundance. We also observed that glyphosate releases phosphorus into the surrounding water, but not in a bioavailable form. The results of this study indicate that environmental concentrations of glyphosate do not seem to impact the community composition or metabolism of lake biofilms under pulse event conditions.
  • OPEN ACCESS
    Uptake and trophic changes in polybrominated diphenyl ethers in the benthic marine food chain in southwestern British Columbia, Canada
    FACETS • Vol. 4 • No. 1 • pp. 20 - 51
    We examined the physical and geochemical effects of sediment on the uptake of polybrominated diphenyl ethers (PBDEs) into marine sediment feeders and their transfer to higher trophic fauna. Sediment PBDEs increased with % total organic carbon (%TOC), organic carbon (OC) flux and grain size (%fines). Tissue PBDE variance was best explained (R2 = 0.70) by sediment acid volatile sulfides (AVS), PBDEs, and organic lability and input, with the highest values near wastewater outfalls. Dry weight tissue/sediment PBDEs declined with increasing sediment PBDEs, resulting in tissue dilution (ratio <1) at >10 000 pg/g in harbours. Ratios also decreased with increasing %fines, resulting in regional differences. These patterns imply that high levels of fines and high sediment concentrations make PBDEs less bioavailable.Dry weight PBDEs increased >100× between background deposit feeders and predators (polychaetes, crabs, bottom fish, seal), but lipid normalized PBDEs barely increased (<1.3%), suggesting remarkably high uptake in low-lipid sediment feeders, and that PBDEs don’t accumulate at higher trophic levels, but lipid content does. Filter feeders had lower lipid-normalized PBDEs than deposit feeders, highlighting the importance of food resources in higher trophic fauna for bioaccumulation.The most profound congener change occurred with sediment uptake, with nona/deca-BDEs declining and tetra-hexa-BDEs increasing. Harbour sediment feeders had more deca-BDEs than other samples, suggesting PBDEs mostly pass unmodifed through them. Deca-BDEs persist patchily in all tissues, reflecting variable dependence on sediment/pelagic food.
  • OPEN ACCESS
    Could a residential wood ash recycling programme be part of the solution to calcium decline in lakes and forests in Muskoka (Ontario, Canada)?
    FACETS • Vol. 4 • No. 1 • pp. 69 - 90
    One possible solution to the recent decline of calcium (Ca) concentrations in Canadian Shield forests and lakes in eastern North America is the addition of Ca-rich wood ash to watersheds. We investigated the feasibility of using small, mainly residential sources of non-industrial wood ash (NIWA) for this purpose by quantifying concentrations of its major nutrients and metals, its toxicity to Daphnia in aqueous extracts, and estimating the amount of NIWA available in the District of Muskoka in central Ontario. Locally collected NIWA averaged 30% Ca, and also contained smaller but significant amounts of K, Mg, Na, and P. Of these, K was so soluble that it was toxic to Daphnia over 48 h in the concentrate and 10-fold dilution; however, sedimented ash was not toxic over 15 d. Most metal levels in NIWA were below targets permitting unrestricted land application. However, Cu and Zn were just above these targets, but well below those for conditional use. Muskoka residents generate about 235 000 kg of NIWA annually, not enough to treat all central Ontario areas affected; however, a NIWA recycling programme implemented across southern Ontario could generate enough ash to solve the Ca decline problem in Muskoka’s forests and lakes.
  • OPEN ACCESS
    Seasonal patterns in deep acoustic backscatter layers near vent plumes in the northeastern Pacific Ocean
    FACETS • Vol. 4 • No. 1 • pp. 183 - 209
    We used moored 75 kHz acoustic Doppler current profilers (ADCPs) to examine seasonal cycles in zooplankton deep scattering layers (DSLs) observed below 1300 m depth at Endeavour Ridge hydrothermal vents. DSLs are present year-round in the lower water column near vent plumes. Temporal variations suggest passive, flow-induced displacements superimposed on migratory movements. Although the strongest DSLs are shallower than the neutrally buoyant plumes (1900–2100 m), anomalies also occur at and below plume depth. Upward movement from plume depth in the main DSL is evident in late summer/fall, resulting in shallower DSLs in winter, consistent with the timing of adult diapause/reproduction in upper-ocean migratory copepods. Movement from the upper ocean to plume depth coincides with pre-adult migration to greater depths in spring. Synchronous 20–40 d cycles in DSLs may account for patchiness in space and time of above-plume zooplankton layers observed in summer during previous net-sampling surveys, and suggests lateral and vertical migratory movements to counter current drift away from plume-derived food sources. Persistent near-bottom DSLs move vertically between the spreading plume and seafloor. Historical net data suggests that these are deep, resident fauna. Unlike upper ocean fauna, they seem to be advected considerable distances from the ridge axis, where they are evident as remnant scattering layers.
  • OPEN ACCESS
    Quantifying the fate of wastewater nitrogen discharged to a Canadian river
    FACETS • Vol. 4 • No. 1 • pp. 315 - 335
    Addition of nutrients, such as nitrogen, can degrade water quality in lakes, rivers, and estuaries. To predict the fate of nutrient inputs, an understanding of the biogeochemical cycling of nutrients is needed. We develop and employ a novel, parsimonious, process-based model of nitrogen concentrations and stable isotopes that quantifies the competing processes of volatilization, biological assimilation, nitrification, and denitrification in nutrient-impacted rivers. Calibration of the model to nitrogen discharges from two wastewater treatment plants in the Grand River, Ontario, Canada, show that ammonia volatilization was negligible relative to biological assimilation, nitrification, and denitrification within 5 km of the discharge points.