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  • OPEN ACCESS
    Correction: The first pterosaur pelvic material from the Dinosaur Park Formation (Campanian) and implications for azhdarchid locomotion
    FACETS • Vol. 3 • No. 1 • pp. 192 - 194
    UALVP 56200, originally identified as a partial pelvis of an azhdarchid pterosaur, is a badly broken tyrannosaurid squamosal. Previous conclusions presented about pelvic myology and locomotion in azhdarchids are unsubstantiated and should be disregarded. UALVP 56200 is briefly redescribed here as a squamosal, and provides insights on the extent of cranial pneumaticity in tyrannosaurids.
  • OPEN ACCESS
    Small to large-scale patterns of ground-dwelling spider (Araneae) diversity across northern Canada
    FACETS • Vol. 3 • No. 1 • pp. 880 - 895
    We examined how Arctic spider (Araneae) biodiversity is distributed at multiple spatial scales in northern Canada using a standardized hierarchical sampling design. We investigated which drivers, environmental or spatial, influence the patterns observed. Spatial patterns of Arctic spider species richness and composition were assessed in 12 sites located in arctic, subarctic, and north boreal ecoclimatic regions, spanning 30 degrees of latitude and 80 degrees of longitude. Variation in diversity was partitioned in relation to multiple environmental and spatial drivers of diversity patterns. Over 23 000 adult spiders, representing 306 species in 14 families, were collected in northern Canada, with 107 species (35% of the total species collected) representing new territorial or provincial records. Spider diversity was structured at the regional scale across ecoclimatic regions but was not structured with latitude. Longitudinal patterns of spider diversity across Canada may be explained by post-glacial dispersal. At local scales, diversity was non-randomly distributed and possibly limited by biotic interactions. We recommend the use of ecoclimatic regions as a framework for conservation of biodiversity in northern Canada and spiders as useful bioindicators that can help us understand the effects of climate change across ecoclimatic regions of northern Canada.
  • OPEN ACCESS
    Initial indications of polycyclic aromatic hydrocarbon exposure in Saskatchewan common loons
    FACETS • Vol. 3 • No. 1 • pp. 849 - 857
    Mercury (Hg) and polycyclic aromatic hydrocarbons (PAHs) are global pollutants known for their toxicity to wildlife. Because of their trophic position, common loons (Gavia immer (Brünnich 1764)) are excellent indicators of environmental quality. In 2014 and 2015, tissue samples of ten adult common loons (plus one recapture) were obtained in Meadow Lake Provincial Park, Saskatchewan, and assessed for Hg and PAH exposure. Blood and feather levels of these contaminants are indicative of exposure during breeding and in wintering areas, respectively. Compared with an international Hg database, blood Hg levels were low (<1 μg/g). In most loons (90.5%, 10 out of 11), blood PAH concentrations were also low (<10 ng/g), but high (120 ng/g) for one individual (9.5% 1 out of 11). Feather PAH concentrations were high (95.9 ng/g and 250.6 ng/g) in two of the four loons (50%) caught in 2015. These data indicate that loons breeding in Meadow Lake Provincial Park were exposed to low levels of Hg; however, some individuals are being exposed to PAHs in both their breeding and wintering locations. The effect of these environmental pollutants on individual loon fitness is unclear, but because of their extreme toxicity in biological systems we suggest that future monitoring in the surrounding region is warranted.
  • OPEN ACCESS
    Estimating the annual distribution of monarch butterflies in Canada over 16 years using citizen science data
    FACETS • Vol. 4 • No. 1 • pp. 238 - 253
    Monarch butterflies (Danaus plexippus, Linnaeus, 1758) are comprised of two migratory populations separated by the Rocky Mountains and are renowned for their long-distance movements among the United States, Canada, and Mexico. Both populations have declined over several decades across North America prompting all three countries to evaluate conservation efforts. Monitoring monarch distribution and abundance is a necessary aspect of ongoing management in Canada where they are a species at risk. We used presence-only data from two citizen science data sets to estimate the annual breeding distribution of monarch butterflies in Canada between 2000 and 2015. Monarch breeding distribution in Canada varied widely among years owing to natural variation, and when considering the upper 95% of the probability of occurrence, the annual mean breeding distribution in Canada was 484 943 km2 (min: 173 449 km2; max: 1 425 835 km2). The area of occurrence was approximately an order of magnitude larger in eastern Canada than in western Canada. Habitat restoration for monarch butterflies in Canada should prioritize productive habitats in southern Ontario where monarchs occur annually and, therefore, likely contribute most to the long-term viability of monarchs in eastern North America. Overall, our assessment sets the geographic context to develop successful management strategies for monarchs in Canada.
  • OPEN ACCESS
    Correction: Honey bee survival is affected by interactions between field-relevant rates of fungicides and insecticides used in apple and blueberry production
    FACETS • Vol. 3 • No. 1 • pp. 530
  • OPEN ACCESS
    Shining light on recent advances in microbial mercury cycling
    FACETS • Vol. 3 • No. 1 • pp. 858 - 879
    Mercury (Hg) is a global pollutant emitted primarily as gaseous Hg0 that is deposited in aquatic and terrestrial ecosystems following its oxidation to HgII. From that point, microbes play a key role in determining Hg’s fate in the environment by participating in sequestration, oxidation, reduction, and methylation reactions. A wide diversity of chemotrophic and phototrophic microbes occupying oxic and anoxic habitats are known to participate directly in Hg cycling. Over the last few years, new findings have come to light that have greatly improved our mechanistic understanding of microbe-mediated Hg cycling pathways in the environment. In this review, we summarize recent advances in microbially mediated Hg cycling and take the opportunity to compare the relatively well-studied chemotrophic pathways to poorly understood phototrophic pathways. We present how the use of genomic and analytical tools can be used to understand Hg transformations and the physiological context of recently discovered cometabolic Hg transformations supported in anaerobes and phototrophs. Finally, we propose a conceptual framework that emphasizes the role that phototrophs play in environmental Hg redox cycling and the importance of better characterizing such pathways in the face of the environmental changes currently underway.
  • OPEN ACCESS
    Sex-biased gene expression and evolution of candidate reproductive transcripts in adult stages of salmon lice (Lepeophtheirus salmonis)
    FACETS • Vol. 4 • No. 1 • pp. 254 - 274
    The salmon louse Lepeophtheirus salmonis (Krøyer 1837) displays numerous sexually dimorphic characteristics. Insights into their underlying molecular components have only recently been explored, which serve to better understand both the basic biology of the louse, associated impacts on drug sensitivity, and evolution of resistance. Expression of 16 L. salmonis genes putatively involved in sexual dimorphism and reproduction were used to determine differences between sexes and better understand responses to mating using RT-qPCR of pre-adult and adult lice. Analysis of these genes revealed the dynamic nature of sex-biased expression across stages. However, female reception of a spermatophore did not appear to impact the expression of these particular genes. Furthermore six of these transcripts and 84 others identified previously in a large-scale louse transcriptomics experiment were used to estimate differences in evolutionary rates and codon-usage bias of sex-related genes using phylogenetic analysis by maximum likelihood (PAML) and codonW. Results suggest male-biased genes are evolving at significantly greater rates than female-biased and unbiased genes as evidenced by higher rates of non-synonymous substitutions and lower codon-usage bias in these genes. These analyses expand our understanding of interactions of sex-biased expression across the pre-adult and adult life stages and provide foundations for better understanding evolutionary differences in sex-biased genes of L. salmonis.
  • OPEN ACCESS
    Correction: Nucleobase-containing compounds evoke behavioural, olfactory, and transcriptional responses in model fishes
    FACETS • Vol. 3 • No. 1 • pp. 598
  • OPEN ACCESS
    Age matters: Submersion period shapes community composition of lake biofilms under glyphosate stress
    FACETS • Vol. 3 • No. 1 • pp. 934 - 951
    The phosphonate herbicide glyphosate, which is the active ingredient in the commercial formulation Roundup®, is currently the most globally used herbicide. In aquatic ecosystems, periphytic biofilms, or periphyton, are at the base of food webs and are often the first communities to be in direct contact with runoff. Microcosm experiments were conducted to assess the effects of a pulse exposure of glyphosate on community composition and chlorophyll a concentrations of lake biofilms at different colonization stages (2 months, 1 year, and 20 years). This is the first study that uses such contrasting submersion periods. Biofilms were exposed to either environmental levels of pure analytical grade glyphosate (6 μg/L, 65 μg/L, and 600 μg/L) or to corresponding phosphorus concentrations. Community composition was determined by deep sequencing of the 18S and 16S rRNA genes to target eukaryotes and cyanobacteria, respectively. The results showed that submersion period was the only significant contributor to community structure. However, at the taxon level, the potentially toxic genus Anabaena was found to increase in relative abundance. We also observed that glyphosate releases phosphorus into the surrounding water, but not in a bioavailable form. The results of this study indicate that environmental concentrations of glyphosate do not seem to impact the community composition or metabolism of lake biofilms under pulse event conditions.
  • OPEN ACCESS
    Uptake and trophic changes in polybrominated diphenyl ethers in the benthic marine food chain in southwestern British Columbia, Canada
    FACETS • Vol. 4 • No. 1 • pp. 20 - 51
    We examined the physical and geochemical effects of sediment on the uptake of polybrominated diphenyl ethers (PBDEs) into marine sediment feeders and their transfer to higher trophic fauna. Sediment PBDEs increased with % total organic carbon (%TOC), organic carbon (OC) flux and grain size (%fines). Tissue PBDE variance was best explained (R2 = 0.70) by sediment acid volatile sulfides (AVS), PBDEs, and organic lability and input, with the highest values near wastewater outfalls. Dry weight tissue/sediment PBDEs declined with increasing sediment PBDEs, resulting in tissue dilution (ratio <1) at >10 000 pg/g in harbours. Ratios also decreased with increasing %fines, resulting in regional differences. These patterns imply that high levels of fines and high sediment concentrations make PBDEs less bioavailable.Dry weight PBDEs increased >100× between background deposit feeders and predators (polychaetes, crabs, bottom fish, seal), but lipid normalized PBDEs barely increased (<1.3%), suggesting remarkably high uptake in low-lipid sediment feeders, and that PBDEs don’t accumulate at higher trophic levels, but lipid content does. Filter feeders had lower lipid-normalized PBDEs than deposit feeders, highlighting the importance of food resources in higher trophic fauna for bioaccumulation.The most profound congener change occurred with sediment uptake, with nona/deca-BDEs declining and tetra-hexa-BDEs increasing. Harbour sediment feeders had more deca-BDEs than other samples, suggesting PBDEs mostly pass unmodifed through them. Deca-BDEs persist patchily in all tissues, reflecting variable dependence on sediment/pelagic food.
  • OPEN ACCESS
    Seasonal patterns in deep acoustic backscatter layers near vent plumes in the northeastern Pacific Ocean
    FACETS • Vol. 4 • No. 1 • pp. 183 - 209
    We used moored 75 kHz acoustic Doppler current profilers (ADCPs) to examine seasonal cycles in zooplankton deep scattering layers (DSLs) observed below 1300 m depth at Endeavour Ridge hydrothermal vents. DSLs are present year-round in the lower water column near vent plumes. Temporal variations suggest passive, flow-induced displacements superimposed on migratory movements. Although the strongest DSLs are shallower than the neutrally buoyant plumes (1900–2100 m), anomalies also occur at and below plume depth. Upward movement from plume depth in the main DSL is evident in late summer/fall, resulting in shallower DSLs in winter, consistent with the timing of adult diapause/reproduction in upper-ocean migratory copepods. Movement from the upper ocean to plume depth coincides with pre-adult migration to greater depths in spring. Synchronous 20–40 d cycles in DSLs may account for patchiness in space and time of above-plume zooplankton layers observed in summer during previous net-sampling surveys, and suggests lateral and vertical migratory movements to counter current drift away from plume-derived food sources. Persistent near-bottom DSLs move vertically between the spreading plume and seafloor. Historical net data suggests that these are deep, resident fauna. Unlike upper ocean fauna, they seem to be advected considerable distances from the ridge axis, where they are evident as remnant scattering layers.
  • OPEN ACCESS
    Quantifying the fate of wastewater nitrogen discharged to a Canadian river
    FACETS • Vol. 4 • No. 1 • pp. 315 - 335
    Addition of nutrients, such as nitrogen, can degrade water quality in lakes, rivers, and estuaries. To predict the fate of nutrient inputs, an understanding of the biogeochemical cycling of nutrients is needed. We develop and employ a novel, parsimonious, process-based model of nitrogen concentrations and stable isotopes that quantifies the competing processes of volatilization, biological assimilation, nitrification, and denitrification in nutrient-impacted rivers. Calibration of the model to nitrogen discharges from two wastewater treatment plants in the Grand River, Ontario, Canada, show that ammonia volatilization was negligible relative to biological assimilation, nitrification, and denitrification within 5 km of the discharge points.
  • OPEN ACCESS
    Does a carbonatite deposit influence its surrounding ecosystem?
    FACETS • Vol. 4 • No. 1 • pp. 389 - 406
    Carbonatites are unusual alkaline rocks with diverse compositions. Although previous work has characterized the effects these rocks have on soils and plants, little is known about their impacts on local ecosystems. Using a deposit within the Great Lakes–St. Lawrence forest in northern Ontario, Canada, we investigated the effect of a carbonatite on soil chemistry and on the structure of plant and soil microbial communities. This was done using a vegetation survey conducted above and around the deposit, with corresponding soil samples collected for determining soil nutrient composition and for assessing microbial community structure using 16S/ITS Illumina Mi-Seq sequencing. In some soils above the deposit a soil chemical signature of the carbonatite was found, with the most important effect being an increase in soil pH compared with the non-deposit soils. Both plants and microorganisms responded to the altered soil chemistry: the plant communities present in carbonatite-impacted soils were dominated by ruderal species, and although differences in microbial communities across the surveyed areas were not obvious, the abundances of specific bacteria and fungi were reduced in response to the carbonatite. Overall, the deposit seems to have created microenvironments of relatively basic soil in an otherwise acidic forest soil. This study demonstrates for the first time how carbonatites can alter ecosystems in situ.
  • OPEN ACCESS
    Bed bugs: The move to humans as hosts
    FACETS • Vol. 4 • No. 1 • pp. 105 - 110
    Cimicid insects, bed bugs and their allies, include about 100 species of blood-feeding ectoparasites. Among them, a few have become widespread and abundant pests of humans. Cimicids vary in their degree of specialization to hosts. Whereas most species specialize on insectivorous birds or bats, the common bed bug can feed on a range of distantly related host species, such as bats, humans, and chickens. We suggest that association with humans and generalism in bed bugs led to fundamentally different living conditions that fostered rapid growth and expansion of their populations. We propose that the evolutionary and ecological success of common bed bugs reflected exploitation of large homeothermic hosts (humans) that sheltered in buildings. This was a departure from congeners whose hosts are much smaller and often heterothermic. We argue that interesting insights into the biology of pest species may be obtained using an integrated view of their ecology and evolution.
  • OPEN ACCESS
    Correction: Small- to large-scale patterns of ground-dwelling spider (Araneae) diversity across northern Canada
    FACETS • Vol. 3 • No. 1 • pp. 958 - 962
  • OPEN ACCESS
    A human impact metric for coastal ecosystems with application to seagrass beds in Atlantic Canada
    FACETS • Vol. 4 • No. 1 • pp. 210 - 237
    Coastal biogenic habitats are vulnerable to human impacts from both terrestrial and marine realms. Yet the broad spatial scale used in current approaches of quantifying anthropogenic stressors is not relevant to the finer scales affecting most coastal habitats. We developed a standardized human impact metric that includes five bay-scale and four local-scale (0–1 km) terrestrial and marine-based impacts to quantify the magnitude of anthropogenic impacts to coastal bays and nearshore biogenic habitats. We applied this metric to 180 seagrass beds (Zostera marina), an important biogenic habitat prioritized for marine protection, in 52 bays across Atlantic Canada. The results show that seagrass beds and coastal bays exist across a wide human impact gradient and provide insight into which are the most and least affected by human threats. Generally, land alteration, nutrient loading, and shellfish aquaculture were higher in the Gulf of St. Lawrence, whereas invasive species and fishing activities were higher along the Atlantic coast. Sixty-four percent of bays were at risk of seagrass decline from nitrogen loading. We also found high within-bay variation in impact intensity, emphasizing the necessity of quantifying impacts at multiple spatial scales. We discuss implications for management and conservation planning, and application to other coastal habitats in Canada and beyond.
  • OPEN ACCESS
    Muted responses to Ag accumulation by plankton to chronic and pulse exposure to silver nanoparticles in a boreal lake
    FACETS • Vol. 4 • No. 1 • pp. 566 - 583
    Silver nanoparticles (AgNPs) are an emerging class of contaminants with the potential to impact ecosystem structure and function. AgNPs are antimicrobial, suggesting that microbe-driven ecosystem functions may be particularly vulnerable to AgNP exposure. Predicting the environmental impacts of AgNPs requires in situ investigation of environmentally relevant dosing regimens over time scales that allow for ecosystem-level responses. We used 3000 L enclosures installed in a boreal lake to expose plankton communities to chronic and pulse AgNP dosing regimens with concentrations mimicking those recorded in natural waters. We compared temporal patterns of plankton responses, Ag accumulation, and ecosystem metabolism (i.e., daily ecosystem respiration, gross primary production, and net ecosystem production) for 6 weeks of chronic dosing and 3 weeks following a pulsed dose. Ag accumulated in microplankton and zooplankton, but carbon-specific Ag was nonlinear over time and generally did not predict plankton response. Ecosystem metabolism did not respond to either AgNP exposure type. This lack of response corresponded with weak microplankton responses in the chronic treatments but did not reflect the stronger microplankton response in the pulse treatment. Our results suggest that lake ecosystem metabolism is somewhat resistant to environmentally relevant concentrations of AgNPs and that organismal responses do not necessarily predict ecosystem-level responses.
  • OPEN ACCESS
    Contingent strategies of risk management by snowshoe hares
    FACETS • Vol. 4 • No. 1 • pp. 407 - 422
    Prey individuals employ several adaptive behaviours to reduce predation risk. We need to learn how those behaviours interact in an overall strategy of risk management, how strategies vary with changing conditions, and whether some behaviours might compensate for others. I addressed these issues with manipulative experiments evaluating how snowshoe hares’ (Lepus americanus) vigilance varies with their giving-up densities (GUDs) in artificial food patches. I tested whether the results, collected when there was no evidence of predation, were congruent with an earlier study under higher predation. When predator sign was common, vigilance depended directly on habitat. But when risk was low, habitat’s influence on vigilance was indirect. Hares were least vigilant during the new moon where the distance to escape habitat was far, but only in open risky habitat. Hares were more vigilant during the full moon, but only at stations far from escape habitat. Moon phase and additional cover had no effect on GUDs that were highest at open risky stations far from escape habitat. The results suggest that reduced risk allowed hares to allocate less time to vigilance, but they needed to forage for similar amounts of food during each moon phase to maintain their energetic state.
  • OPEN ACCESS
    Distinguishing eastern North American forest moth pests by wing-scale ultrastructure: potential applications in paleoecology
    FACETS • Vol. 4 • No. 1 • pp. 493 - 506
    The use of fossil moth wing scales has recently been introduced as a new method to reconstruct population histories of lepidopterans and provide a proxy for insect disturbance. We investigated the potential for using wing-scale ultrastructure to distinguish between the five most common outbreak species of moth pests in eastern North America: spruce budworm (Choristoneura fumiferana Clemens), hemlock looper (Lambdina fiscellaria Guenée), forest tent caterpillar (Malacosoma disstria Hübner), blackheaded budworm (Acleris variana Fernie), and jack pine budworm (Choristoneura pinus Freeman). Using scanning electron images of scales, we made qualitative and quantitative comparisons of morphological traits at the ultrastructural level. We found that hemlock looper and eastern blackheaded budworm scales could be categorically separated from each other and from the three other species. We developed a quadratic discriminant function using measurements of ultrastructure traits that distinguishes scales of the three remaining species with an overall accuracy of 66%. We found that forest tent caterpillar could be well separated based on these traits, but we were less confident in distinguishing the closely related jack pine and spruce budworm. Our method offers potential advantages in scale identification for future studies in paleoecology, while providing the additional advantage of not requiring intact, unfolded, and undamaged scales.
  • OPEN ACCESS
    An analysis of threats and factors that predict trends in Canadian vertebrates designated as at-risk
    FACETS • Vol. 5 • No. 1 • pp. 49 - 66
    The identification of factors that predict trends in population abundance is critical to formulate successful conservation strategies. Here, we explore population trends of Canadian vertebrates assessed as “at-risk” by the Committee on the Status of Endangered Wildlife in Canada and the threats affecting these trends using data from the Canadian Living Planet Index. We investigate how threat profiles—the combination of threats for a given species—vary among species and taxonomic groups. We then investigate threat profile as a predictor of temporal trends—both exclusively and in combination with additional biotic and abiotic factors. Species had 5.06 (±2.77) threats listed on average, and biological resource use (BRU) was the most frequently cited. Our analysis also revealed an association between taxonomic group and population trends, as measured by the proportion of annual increases (years with a positive interannual change). By contrast, the predictive power of threat profile was poor. This analysis yielded some useful insight for conservation action, particularly the prioritization of abating BRU. However, the predictive models were not as meaningful as originally anticipated. We provide recommendations on methodological improvements to advance the understanding of factors that predict trends in population abundance for prioritizing conservation action.
  • OPEN ACCESS
    Spatial segregation and habitat partitioning of bobcat and Canada lynx
    FACETS • Vol. 5 • No. 1 • pp. 503 - 522
    Harvest records suggest that the abundance of bobcats (Lynx rufus) has increased and the leading edge of their distribution has spread northward, while the trailing edge of the Canada lynx (Lynx canadensis) range has contracted in Ontario, Canada. There has been a debate about whether these closely related felids might compete in areas of sympatry, but there is little research on sympatric populations of bobcat and lynx. Both species are found on the north shore of Lake Huron in Ontario, Canada, which provided an opportunity to investigate their spatial patterns and habitat use. We surveyed snowmobile routes for snow tracks over three winters and estimated probability of occupancy for the two felid species while accounting for detectability. Bobcat and lynx tracks were never found on the same survey route. Bobcat occupancy increased with habitat heterogeneity, whereas lynx occupancy increased with homogeneity. Our results fit with the common assumption of the generalist and specialist natures of bobcat and lynx, respectively. Our findings suggest that bobcats invaded former lynx territory after these areas became vacant. The story of the bobcat and the lynx is one of the loss of a unique, boreal specialist due to anthropogenic change, and eventual replacement by an adaptable generalist.
  • OPEN ACCESS
    Correction: Impacts of hypoxia on estuarine macroinvertebrate assemblages across a regional nutrient gradient
    FACETS • Vol. 4 • No. 1 • pp. 161
  • OPEN ACCESS
    Complementary responses of stream fish and benthic macroinvertebrate assemblages to environmental drivers in a shale-gas development area
    FACETS • Vol. 5 • No. 1 • pp. 200 - 227
    Shale-gas production could impact freshwater quality through contamination of the physical and chemical habitat (e.g., fracturing fluids, untreated or treated effluent) or development-related impacts. Despite environmental concerns, information is lacking to support biomonitoring as a diagnostic tool to assess impacts of shale-gas production. We characterized water quality and biota in areas of high shale gas potential (Early Carboniferous bedrock in New Brunswick, Canada) and surrounding geologic areas, and we assessed patterns in benthic macroinvertebrate (BMI) and fish assemblages. Early Carboniferous stations differed primarily based on water chemistry, and BMI were associated with a gradient in conductivity and temperature across geologic classes. Concordance analysis indicated similar classification of stations by both organism groups, though fish were more related to turbidity and nutrients. Concordance among fish and BMI was strongest at high conductivity, Early Carboniferous stations. These results suggest that geology plays a strong role in driving abiotic habitats and biotic communities of streams, even at small spatial scales. Furthermore, they suggest BMI and fish can provide complementary information for biomonitoring in shale-gas development areas, with BMI responding to increased ion concentrations from surface water contamination, and fish responding to changes in nutrients and turbidity resulting from development.
  • OPEN ACCESS
    Tracking insect outbreaks: a case study of community-assisted moth monitoring using sex pheromone traps
    FACETS • Vol. 5 • No. 1 • pp. 91 - 104
    Insect outbreaks can cover vast geographic areas making it onerous to cost-effectively monitor populations to address management or ecological questions. Community science (or citizen science), which entails engaging the public to assist with data collection, provides a possible solution to this challenge for the spruce budworm (Choristoneura fumiferana Clemens), a major defoliating pest in North America. Here, we lay out the Budworm Tracker Program, a contributory community science program developed to help monitor spruce budworm moths throughout eastern Canada. The program outsources free pheromone trap kits to volunteers who periodically check and collect moths from their traps throughout the budworm flight period, then return them in a prepaid envelope to the organizers. Over three years, the program engaged an average of 216–375 volunteers and yielded a data return rate of 68%–89%, for a total of 16 311–54 525 moths per year. Volunteer retention among years was 71%–89%. Data from this program offer compelling evidence for the range of long-distance moth dispersal. Although our program was designed for spruce budworm, this template could easily be adapted for forestry, urban forestry, and agricultural systems to monitor any of the numerous organisms for which there is an established trapping method.
  • OPEN ACCESS
    Ecological research should consider Indigenous peoples and stewardship
    FACETS • Vol. 5 • No. 1 • pp. 534 - 537
    The relationship between Indigenous peoples and the functioning of terrestrial ecosystems has received increased attention in recent years. As a result, it is becoming more critical for researchers focusing on terrestrial ecosystems to work with Indigenous groups to gain a better understanding of how past and current stewardship of these lands may influence results. As a case study to explore these ideas, we systematically reviewed articles from 2008 to 2018 where research was conducted in North America, South America, and Oceania. Of the 159 articles included, 11 included acknowledgement of Indigenous stewardship, acknowledged the Indigenous Territories or lands, or named the Indigenous group on whose Territory the research was conducted. Within the scope of this case study, our results demonstrate an overall lack of Indigenous acknowledgement or consideration within the scope of our review. Given the recent advancements in our understanding of how Indigenous groups have shaped their lands, we implore researchers to consider collaboration among local Indigenous groups as to better cultivate relationships and foster a greater understanding of their ecosystems.
  • OPEN ACCESS
    A turtle population study in an isolated urban wetland complex in Ontario reveals a few surprises
    FACETS • Vol. 4 • No. 1 • pp. 584 - 597
    We report on the results of the first mark–recapture survey of freshwater turtles in an isolated urban wetland complex in one of Canada’s fastest growing municipalities. Although we found turtles in every surveyed wetland, the density and assemblage of turtles in smaller wetlands were significantly different than in larger wetland bodies. We also documented two species of turtles that were thought to be absent from this wetland complex, the Northern Map turtle and Eastern Musk turtle. We noted that a wetland that was bisected by a high-traffic road showed a male-skewed sex ratio in the population of Midland Painted turtles but not in the population of Eastern Snapping turtles. As a whole, the sex ratios inside the wetland complex were not skewed. These results reinforce the conclusions of a previous study of a single wetland within this same complex that had found a correlation between road mortality and a male-skewed sex ratio in Midland painted turtles. We discuss population sources and sinks within the complex and the importance of protecting the overland corridors that support the safe turtle movements within this provincially significant wetland complex.
  • OPEN ACCESS
    A molecular assessment of infectious agents carried by Atlantic salmon at sea and in three eastern Canadian rivers, including aquaculture escapees and North American and European origin wild stocks
    FACETS • Vol. 5 • No. 1 • pp. 234 - 263
    Infectious agents are key components of animal ecology and drivers of host population dynamics. Knowledge of their diversity and transmission in the wild is necessary for the management and conservation of host species like Atlantic salmon (Salmo salar). Although pathogen exchange can occur throughout the salmon life cycle, evidence is lacking to support transmission during population mixing at sea or between farmed and wild salmon due to aquaculture exposure. We tested these hypotheses using a molecular approach that identified infectious agents and transmission potential among sub-adult Atlantic salmon at marine feeding areas and adults in three eastern Canadian rivers with varying aquaculture influence. We used high-throughput qPCR to quantify infection profiles and next generation sequencing to measure genomic variation among viral isolates. We identified 14 agents, including five not yet described as occurring in Eastern Canada. Phylogenetic analysis of piscine orthoreovirus showed homology between isolates from European and North American origin fish at sea, supporting the hypothesis of intercontinental transmission. We found no evidence to support aquaculture influence on wild adult infections, which varied relative to environmental conditions, life stage, and host origin. Our findings identify research opportunities regarding pathogen transmission and biological significance for wild Atlantic salmon populations.
  • OPEN ACCESS
    How to rescue Ontario’s Endangered Species Act: a biologist’s perspective
    FACETS • Vol. 5 • No. 1 • pp. 423 - 431
  • OPEN ACCESS
    Peer-reviewed scientific contributions from Canadian zoos and aquariums
    FACETS • Vol. 5 • No. 1 • pp. 381 - 392
    With the widespread loss of biodiversity, zoos and aquariums are striving to become leaders in biodiversity conservation and research. Canada’s Accredited Zoos and Aquariums (CAZA) is a nonprofit organization created to represent its members, including as agencies of conservation and science. However, the contribution of CAZA members to conservation and science has not been quantified. We used research productivity in the form of peer-reviewed publications to systematically quantify biodiversity conservation engagement by CAZA institutions. We extracted publications from the ISI Web of Science database and found that the annual number of publications increased over time. CAZA members published most in the area of veterinary science, with few publications in biodiversity conservation. Organization age, research-orientated mission statements, and financial assets were significant predictors of research productivity. CAZA institutions also published significantly less (X¯ = 12.5 ± 5.52 SE) than members of the Association of Zoos and Aquariums (X¯ = 24.27 ± 5.08 SE), based in the United States. Zoos and aquariums are important resources in mitigating biodiversity loss, and are increasing their research output in this area. Nonetheless, only a small proportion of publications were in biodiversity conservation, and the majority of all publications occurred in zoo-centric journals.
  • OPEN ACCESS
    Can the toxicity of naphthenic acids in oil sands process-affected water be mitigated by a green photocatalytic method?
    FACETS • Vol. 5 • No. 1 • pp. 474 - 487
    Our study evaluates the efficacy of a “green” (i.e., sustainable, recyclable, and reusable) technology to treat waste waters produced by Canada’s oil sands industry. We examined the ability of a novel advanced oxidative method—ultra-violet photocatalysis over titanium dioxide (TiO2)-coated microparticles—to reduce the toxicity of naphthenic acid fraction components (NAFC) to early life stages of the fathead minnow (Pimephales promelas). Lengthening the duration of photocatalysis resulted in greater removal of NAFC from bioassay exposure waters; low- and high-intensity treatments reduced NAFC concentrations to about 20 and 3 mg/L (by Fourier-transformed infrared spectroscopy, FTIR), respectively. Treatments reduced the acute lethality of NAFC to fathead minnows by over half after low-intensity treatment and three-fold after high-intensity treatment. However, incomplete degradation in low-intensity treatments increased the incidence of chronic toxicity relative to untreated NAFC solutions and cardiovascular abnormalities were common even with >80% of NAFC degraded. Our findings demonstrate that photocatalysis over TiO2 microparticles is a promising method for mitigating the toxicity of oil sands process-affected water-derived NAFC to fish native to the oil sands region, but the intensity of the photocatalytic treatment needs to be considered carefully to ensure adequate mineralization of toxic constituents.
  • OPEN ACCESS
    Fluctuating water levels influence access to critical habitats for threatened Cowichan Lake lamprey
    FACETS • Vol. 5 • No. 1 • pp. 488 - 502
    Cowichan Lake lamprey (Entosphenus macrostomus) is a threatened species resident to Mesachie Lake, Cowichan Lake, and adjoining Bear Lake and their major tributaries in British Columbia. Decreases in trapping success have created concerns that the population is declining. Some potential threats include water use, climate change, and management actions. Owing to the absence of long-term data on population trends, little information is available to estimate habitat quality and factors that influence it. We sought to fill this gap by examining associations between habitat area and variables representing suspected key drivers of habitat availability. Critical habitat areas were imaged using an unmanned aerial vehicle over a period of three years at three sites at Cowichan Lake and a subsequent habitat area was classified. Meteorological and anthropogenic controls on habitat area were investigated through automatic relevance detection regression models. The major driver of habitat area during the critical spawning period was water level during the storage season, which also depends on the meteorological variables and anthropogenic control. It is recommended that regulation of the weir should aim to ensure that the water level remains above the 1 m mark, which roughly equates to the 67% coverage of water on the habitat area used for spawning.
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    Variation in isotopic niche, digestive tract morphology, and mercury concentrations in two sympatric waterfowl species wintering in Atlantic Canada
    FACETS • Vol. 5 • No. 1 • pp. 393 - 408
    Sympatric communities of organisms may exploit different ecological niches to avoid intra- and interspecific competition. We examined the isotopic niches of American black ducks (Anas rubripes) and mallards (A. platyrhynchos) wintering in coastal and urban areas of Atlantic Canada and compared isotopic niche with digestive tract morphologies and blood mercury (Hg) concentrations. Isotopic niche width (for δ13C and δ15N) varied between the three groups of ducks studied, with coastally foraging black ducks exhibiting the widest isotopic niche, followed by coastal mallards, while urban feeding black ducks had a narrow isotopic niche. These niche differences had physical and chemical consequences: coastal black ducks had longer digestive tracts, a larger range in gizzard sizes, and higher and more variable Hg concentrations than urban black ducks and coastal mallards. This plasticity in ecological niche may reduce competition among and within species, and subsequently explain why winter numbers of black ducks and mallards have increased in Atlantic Canada.
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    Role of green alder in boreal conifer growth: competitor or facilitator?
    FACETS • Vol. 5 • No. 1 • pp. 166 - 181
    Sustainable forest management implies successful regeneration after disturbances. Low N availability and competition can, however, limit tree establishment in boreal ecosystems. To develop silviculture strategies that maintain productivity in such context, we established a field trial in northern Québec, Canada. We evaluated if a companion N2-fixing species (Alnus alnobetula) promotes or hinders Picea mariana and Pinus banksiana establishment over six growing seasons. We tested if Alnus has a facilitation effect through nutritional processes and a competition effect through light interception. Foliar stable nitrogen isotope ratio (δ15N = 15N/14N, ‰) results confirmed that Alnus obtains a substantial part of its N through biological fixation and represents an N source in this system. Although we did not observe increased foliar N concentrations in either conifer species in the presence of Alnus, Pinus growth was nonetheless higher in presence of Alnus, whereas no difference was observed for Picea. In the plots where Alnus cohabited with the conifers, the former had a negative impact on seedling growth, suggesting a significant competition for light. Overall, the net effect of Alnus was positive for Pinus and neutral for Picea. Our results have significant implications for silviculture in N-limited systems, especially in the context of climate change that imposes increased levels of stress on regeneration.
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    Bat bites and rabies: the Canadian scene
    FACETS • Vol. 5 • No. 1 • pp. 367 - 380
    Bats are susceptible to rabies. Although bats may appear to be asymptomatic carriers of rabies for a few days, eventually they fall ill to the viral infection and die. Two of at least four bat-specific variants of rabies virus in Canada have killed humans. Rabies is usually transmitted by biting, but bats are small mammals so their bites may go unnoticed. People exposed to rabid animals should receive postexposure prophylaxis (PEP). With 60 known human deaths from 1950 to 2009, rabies is rare in Canada and the United States of America compared with India where it kills over 100 people annually. In Asia and Africa, most human rabies is acquired from dog bites. In Brazil, dog and bat bites together account for >80% of human rabies. In Canada, rabies is a disease primarily confined to wildlife (foxes, racoons, skunks, and bats). The public image of bats is negatively affected by their association with diseases. Too often bats are victimized by allegations of their role in deadly diseases such as rabies, Ebola, severe acute respiratory syndrome (SARS), and Middle East respiratory syndrome (MERS). In general, bats are not dangerous, but humans should seek treatment if they are bitten by one. (Graphical abstract shows a 4-g elegant myotis biting MBF’s finger—photo by Sherri and Brock Fenton.)
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    Sublethal effects of wild-type and a vIF-2α-knockout Frog virus 3 on postmetamorphic wood frogs (Rana sylvatica): potential for a stage-specific reservoir
    FACETS • Vol. 5 • No. 1 • pp. 738 - 757
    Ranaviruses have been associated with rising numbers of mass die-offs in amphibian populations around the globe. However, most studies on ranaviruses to date focused on larval amphibians. To assess the role of postmetamorphic amphibians in the epidemiology of ranaviruses and to determine the role of viral immune-suppression genes, we performed a bath-exposure study on post-metamorphic wood frogs (Rana sylvatica) using environmentally relevant concentrations of wild-type Frog virus 3 (WT FV3), and a gene-knockout mutant (KO FV3), deficient for the putative immune-suppression gene vIF-2α. We observed a 42% infection rate and 5% mortality across the virus challenges, with infection rates and viral loads following a dose-dependent pattern. Individuals exposed to the knockout variant exhibited significantly decreased growth and increased lethargy compared with wild-type treatments. Although 85% of exposed individuals exhibited common signs of ranavirosis throughout the experiment, most of these individuals did not exhibit signs of infection by 40 d post-exposure. Overall, we showed that even a single short time exposure to environmentally relevant concentrations of ranavirus may cause sublethal infections in postmetamorphic amphibians, highlighting the importance of this life stage in the epidemiology of ranaviruses. Our study also supports the importance of the vIF-2α gene in immune-suppression in infected individuals.
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    Is the cure worse than the disease? Comparing the ecological effects of an invasive aquatic plant and the herbicide treatments used to control it
    FACETS • Vol. 5 • No. 1 • pp. 353 - 366
    Invasive species are known to have negative ecological effects. However, few studies have evaluated the impacts of invasive species relative to the effects of invasive species control, thereby limiting our ability to make informed decisions considering the benefits and drawbacks of a given management approach. To address this gap, we compared the ecological effects of the invasive aquatic plant Eurasian watermilfoil (Myriophyllum spicatum L.) with the effects of lake-wide herbicide treatments used for M. spicatum control using aquatic plant data collected from 173 lakes in Wisconsin, USA. First, a pre–post analysis of aquatic plant communities found significant declines in native plant species in response to lake-wide herbicide treatment. Second, multi-level modeling using a large data set revealed a negative association between lake-wide herbicide treatments and native aquatic plants, but no significant negative effect of invasive M. spicatum. Taken together, our results indicate that lake-wide herbicide treatments aimed at controlling M. spicatum had larger effects on native aquatic plants than did the target of control—invasive M. spicatum. Our comparison reveals an important management tradeoff and encourages careful consideration of how we balance the real and perceived impacts of invasive species and the methods used for their control.
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    Sustaining Canadian marine biodiversity: Policy and statutory progress
    FACETS • Vol. 5 • No. 1 • pp. 264 - 288
    A 2012 Expert Panel Report on marine biodiversity by the Royal Society of Canada (RSC) concluded that Canada faced significant challenges in achieving sustainable fisheries, regulating aquaculture, and accounting for climate change. Relative to many countries, progress by Canada in fulfilling international obligations to sustain biodiversity was deemed poor. To track progress by Canada since 2012, the RSC struck a committee to track policy and statutory developments on matters pertaining to marine biodiversity and to identify policy challenges, and leading options for implementation that lie ahead. The report by the Policy Briefing Committee is presented here. It concluded that Canada has made moderate to good progress in some areas, such as prioritization of oceans stewardship and strengthening of the evidentiary use of science in decision-making. Key statutes were strengthened through amendments, including requirements to rebuild depleted fisheries (Fisheries Act) and new means of creating marine protected areas (Oceans Act) that allowed Canada to exceed its international obligation to protect 10% of coastal and marine areas by 2020. Public release of mandate letters has strengthened ministerial accountability. However, little or no progress has been made in reducing regulatory conflict with Fisheries and Oceans Canada (DFO), decreasing ministerial discretion under the Fisheries Act, clarifying the role of science in sustainable fisheries policy, and accounting for climate change. Five future policy challenges are identified: (1) Ensure climate change impacts and projections are incorporated into ocean-related decision making and planning processes; (2) Resolve DFO’s regulatory conflict to conserve and exploit biodiversity; (3) Limit ministerial discretionary power in fisheries management decisions; (4) Clarify ambiguities in how the Precautionary Approach is applied in sustainable fisheries policy; and (5) Advance and implement marine spatial planning. Since 2012, there has been progress in recovering and sustaining the health of Canada’s oceans. Failure to further strengthen biodiversity conservation threatens the capacity of Canada’s oceans to provide ecosystem services that contribute to the resilience of marine life and the well-being of humankind. Unprecedented and enduring changes in the ocean caused by climate change have made the achievement of meaningful progress all the more urgent.
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    Amphibian ranaviruses in Europe: important directions for future research
    FACETS • Vol. 5 • No. 1 • pp. 598 - 614
    Ranaviruses are an emerging group of pathogens capable of infecting all cold-blooded vertebrates. In Europe, ranaviruses pose a particularly potent threat to wild amphibian populations. Since the 1980s research on amphibian-infecting ranaviruses in Europe has been growing. The wide distribution of amphibian populations in Europe, the ease with which many are monitored, and the tractable nature of counterpart ex situ experimental systems have provided researchers with a unique opportunity to study many aspects of host–ranavirus interactions in the wild. These characteristics of European amphibian populations will also enable researchers to lead the way as the field of host–ranavirus interactions progresses. In this review, we provide a summary of the current key knowledge regarding amphibian infecting ranaviruses throughout Europe. We then outline important areas of further research and suggest practical ways each could be pursued. We address the study of potential interactions between the amphibian microbiome and ranaviruses, how pollution may exacerbate ranaviral disease either as direct stressors of amphibians or indirect modification of the amphibian microbiome. Finally, we discuss the need for continued surveillance of ranaviral emergence in the face of climate change.
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    An examination of the Iridovirus core genes for reconstructing Ranavirus phylogenies
    FACETS • Vol. 5 • No. 1 • pp. 523 - 533
    Ranaviruses are globally emerging infections of poikilothermic vertebrates and belong to the viral family Iridoviridae. The six species of ranaviruses are responsible for unknown numbers of infections and disease and mortality events around the world in amphibians, fish, and reptiles. Genomic investigations have shown that there are 24 core genes shared by all iridoviruses. In this study, we examine the utility of each of these genes in reconstructing phylogenetic relationships across six species of Ranavirus. We also performed dot-plot analysis for the 17 isolates in the study. For large-scale differentiation, using the major capsid protein gene creates a tree similar to the whole genome tree. Other comparable genes include open reading frame (ORF) 19R (a serine–theonine protein kinase) and ORF 88R (Erv I/Alr Family protein). The poorest candidate for phylogenetic reconstruction, due to high homology, was ORF 1R (a putative replication factor and (or) DNA binding-packing protein). There are a plethora of genes that may be useful to examine phylogenies at smaller scales (e.g., to examine local adaptation); however, they do not necessarily belong to the set of highly conserved core genes.
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    Discovery of granulocyte-lineage cells in the skin of the amphibian Xenopus laevis
    FACETS • Vol. 5 • No. 1 • pp. 571 - 597
    The ranavirus Frog Virus 3 (FV3) and the chytrid fungus Batrachochytrium dendrobatidis (Bd) are significant contributors to the global amphibian declines and both pathogens target the amphibian skin. We previously showed that tadpoles and adults of the anuran amphibian Xenopus laevis express notable levels of granulocyte chemokine genes (cxcl8a and cxcl8b) within their skin and likely possess skin-resident granulocytes. Presently, we show that tadpole and adult X. laevis indeed possess granulocyte-lineage cells within their epidermises that are distinct from their skin mast cells, which are found predominantly in lower dermal layers. These esterase-positive cells responded to (r)CXCL8a and rCXCL8b in a concentration- and CXCR1/CXCR2-dependent manner, possessed polymorphonuclear granulocyte morphology, granulocyte marker surface staining, and exhibited distinct immune gene expression from conventional granulocytes. Our past work indicates that CXCL8b recruits immunosuppressive granulocytes, and here we demonstrated that enriching esterase-positive skin granulocytes with rCXCL8b (but not rCXCL8a) may increase tadpole susceptibility to FV3 and adult frog susceptibility to Bd. Furthermore, pharmacological depletion of skin-resident granulocytes increased tadpole susceptibility to FV3. This manuscript provides new insights into the composition and roles of immune cells within the amphibian skin, which is a critical barrier against pathogenic contributors to the amphibian declines.
  • OPEN ACCESS
    Ranaviruses in captive and wild Australian lizards
    FACETS • Vol. 5 • No. 1 • pp. 758 - 768
    Ranaviral infections have been associated with mass mortality events in captive and wild amphibian, fish, and reptile populations globally. In Australia, two distinct types of ranaviruses have been isolated: epizootic haematopoietic necrosis virus in fish and a Frog virus 3-like ranavirus in amphibians. Experimental studies and serum surveys have demonstrated that several Australian native fish, amphibian, and reptile species are susceptible to infection and supported the theory that ranavirus is naturally circulating in Australian herpetofauna. However, ranaviral infections have not been detected in captive or wild lizards in Australia. Oral-cloacal swabs were collected from 42 wild lizards from northern Queensland and 83 captive lizards from private collections held across three states/territories. Samples were tested for ranaviral DNA using a quantitative PCR assay. This assay detected ranaviral DNA in 30/83 (36.1%) captive and 33/42 (78.6%) wild lizard samples. This is the first time molecular evidence of ranavirus has been reported in Australian lizards.
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    Temperature-dependent infection of freshwater turtle hatchlings, Emydura macquarii krefftii, inoculated with a ranavirus isolate (Bohle iridovirus, Iridoviridae)
    FACETS • Vol. 5 • No. 1 • pp. 821 - 830
    Fish, amphibians, and reptiles exhibit temperature-dependent ranaviral disease. We performed an experimental infection at four different environmental temperatures (16, 22, 28, and 34 °C) to investigate the effect of temperature on ranaviral infection in Krefft’s turtle (Emydura macquarii krefftii). Infection rates and viral loads were determined by quantitative polymerase chain reaction to detect ranaviral DNA in liver samples at 21 d postexposure. The rate of infection differed across the temperature treatment groups. Infection rates were 44%, 90%, 60%, and 10% for the 16, 22, 28, and 34 °C temperature groups, respectively. Highest viral load was observed in the 28 °C temperature group, and there was a statistically significant difference in viral load between the 16 and 28 °C temperature groups (p = 0.027). Based on the results of this study, the temperature of maximal infection rate for ranaviral infection in Krefft’s river turtles is estimated to be 23.2 °C (SD = 4.5). The findings of this study can inform management decisions in terms of disease control and treatment and form a platform for modelling disease outbreaks.
  • OPEN ACCESS
    Global patterns of ranavirus detections
    FACETS • Vol. 6 • pp. 912 - 924
    Ranaviruses are emerging pathogens of poikilothermic vertebrates. In 2015 the Global Ranavirus Reporting System (GRRS) was established as a centralized, open access, online database for reports of the presence (and absence) of ranavirus around the globe. The GRRS has multiple data layers (e.g., location, date, host(s) species, and methods of detection) of use to those studying the epidemiology, ecology, and evolution of this group of viruses. Here we summarize the temporal, spatial, diagnostic, and host-taxonomic patterns of ranavirus reports in the GRRS. The number, distribution, and host diversity of ranavirus reports have increased dramatically since the mid 1990s, presumably in response to increased interest in ranaviruses and the conservation of their hosts, and also the availability of molecular diagnostics. Yet there are clear geographic and taxonomic biases among the reports. We encourage ranavirus researchers to add their studies to the portal because such collation can provide collaborative opportunities and unique insights to our developing knowledge of this pathogen and the emerging infectious disease that it causes.
  • OPEN ACCESS
    Spatial distribution and conservation hotspots of mammals in Canada
    FACETS • Vol. 5 • No. 1 • pp. 692 - 703
    High-latitude countries often contain the polar range edge of species that are common farther south, potentially focusing national conservation efforts toward range-edge populations. The global conservation value of edge populations is controversial, but if they occur where biodiversity is high, there need not be trade-offs in protecting them. Using 152 of 158 terrestrial mammal species in Canada, we tested how species’ distributions relate to their national conservation status and total mammal richness. We found that half of “Canadian” mammals had <20% of their global range in Canada. National threat status was strongly associated with range area; mammals considered “at risk” had 42% smaller Canadian ranges than mammals considered secure. However, after accounting for range area, taxa with smaller proportions of their global range in Canada were not more likely to be considered at risk, suggesting edge populations are not inherently more vulnerable. When we calculated mammal diversity across Canada (100 × 100 km grid cells), we found that hotspots of at-risk or range-edge mammals were twice as species rich as nonhotspot cells, containing up to 44% of Canadian mammal diversity per grid cell. Our results suggest that protecting areas with the most at-risk or range-edge mammals would simultaneously protect habitat for many species currently deemed secure.
  • OPEN ACCESS
    Ten simple rules to facilitate evidence implementation in the environmental sciences
    FACETS • Vol. 5 • No. 1 • pp. 642 - 650
    There is a gap between fundamental science and managers. There are many general solutions including the need to better leverage the primary scientific literature for decision-making. Herein, we provide a list of 10 simple rules to support environmental management through better scientific writing and suggest practices for more transparent publications. These rules can also be used as a checklist for reusing the primary literature when searching for relevant evidence in the environmental sciences. We need to better structure knowledge in papers for connections within sustainable societies.
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    Extreme rainfall drives early onset cyanobacterial bloom
    FACETS • Vol. 5 • No. 1 • pp. 899 - 920
    The increasing prevalence of cyanobacteria-dominated harmful algal blooms is strongly associated with nutrient loading and changing climatic patterns. Changes to precipitation frequency and intensity, as predicted by current climate models, are likely to affect bloom development and composition through changes in nutrient fluxes and water column mixing. However, few studies have directly documented the effects of extreme precipitation events on cyanobacterial composition, biomass, and toxin production. We tracked changes in a eutrophic reservoir following an extreme precipitation event, describing an atypically early toxin-producing cyanobacterial bloom and successional progression of the phytoplankton community, toxins, and geochemistry. An increase in bioavailable phosphorus by more than 27-fold in surface waters preceded notable increases in Aphanizomenon flos-aquae throughout the reservoir approximately 2 weeks postevent and ∼5 weeks before blooms typically occur. Anabaenopeptin-A and three microcystin congeners (microcystin-LR, -YR, and -RR) were detected at varying levels across sites during the bloom period, which lasted between 3 and 5 weeks. These findings suggest extreme rainfall can trigger early cyanobacterial bloom initiation, effectively elongating the bloom season period of potential toxicity. However, effects will vary depending on factors including the timing of rainfall and reservoir physical structure.
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    Weighing the importance of animal body size in traditional food systems
    FACETS • Vol. 7 • pp. 286 - 318
    Traditional food systems based on harvest from the local environment are fundamental to the well-being of many communities, but their security is challenged by rapid socio-ecological change. We synthesized literature and data describing how a fundamental form of biodiversity, animal body size, contributes to the security of traditional food systems through relationships with species availability, accessibility, adequacy, and use. We found larger vertebrate species were more available, accessible, and used on a per kilogram basis, particularly for mammals. Conversely, larger species were no more or less adequate from a combined nutritional, health, and cultural perspective. Larger species represented more biomass, and this biomass required less time to harvest, with greater but more variable mean caloric returns over time. Smaller species provided more consistent caloric returns and were harvested during documented shortages of prey. This reliance on species with a range of body sizes is consistent with optimal foraging theory and the evolutionary value of flexibility, and highlights the importance of a biodiverse pool of species for traditional food security in times of change. Our synthesis of published literature and data highlights the many socio-ecological correlates of species size and how these relate to the security of traditional food systems.
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    Lack of molecular detection of frog virus 3-like ranavirus (FV3) in mosquitoes during natural outbreak and nonoutbreak conditions
    FACETS • Vol. 5 • No. 1 • pp. 812 - 820
    Ranaviruses are worldwide pathogens of ectothermic vertebrates that can threaten herptile conservation efforts. Identifying transmission routes is critical for understanding disease ecology and promoting species conservation. Frog virus 3 (FV3) DNA was detected in mosquitoes during a ranavirus outbreak in semicaptive box turtles, but the role that insect vectors play under natural conditions is unknown. To address this knowledge gap, we collected mosquito species known to take blood meals from reptiles and amphibians (Aedes canadensis, Culex erraticus, Culex territans, and Uranotaenia sapphirina) from mid-May to early August, 2014, at four study sites in Vermilion County, Illinois, two of which had historic or ongoing FV3 outbreaks in box turtles and amphibians. Mosquitoes were batched by date and species, DNA was extracted, and quantitative polymerase chain reaction was performed for detection of FV3. FV3 was not detected despite one of the sites having an active FV3 outbreak during the study period. Our findings indicate that FV3 detection is uncommon in mosquitoes during outbreak and nonoutbreak conditions at these sites in Illinois. Thus, we cannot establish that mosquitoes contribute to transmission during natural mortality events without performing further studies.
  • OPEN ACCESS
    Comparing metabarcoding and morphological approaches to identify phytoplankton taxa associated with harmful algal blooms
    FACETS • Vol. 5 • No. 1 • pp. 784 - 811
    Molecular techniques are expected to be highly useful in detecting taxa causing harmful algal blooms (HABs). This is the first report in Canada evaluating HABs-related species identification using a combination of morphological and molecular approaches. Microscopy, quantitative polymerase chain reaction (qPCR), and metabarcoding with multiple markers (i.e., 16S, 18S-dinoflagellate and 18S-diatom, large subunit (28S) rDNA) were applied on samples (n = 54) containing suspected harmful algae (e.g., Alexandrium spp., Chattonella sp., Chrysochromulina spp., Dictyocha spp., Heterosigma akashiwo, Protoceratium reticulatum, Pseudochattonella verruculosa, Pseudo-nitzschia spp., Pseudopedinella sp.). Owing to methodology limitations, qPCR result interpretation was limited, although good detectability occurred using previously published assays for Alexandrium tamarense, H. akashiwo, and P. verruculosa. Overall, the multiple-marker metabarcoding results were superior to the morphology-based methods, with the exception of taxa from the silicoflagellate group. The combined results using both 18S markers and the 28S marker together closely corresponded with morphological identification of targeted species, providing the best overall taxonomic coverage and resolution. The most numerous unique taxa were identified using the 18S-dinoflagellate amplicon, and the best resolution to the species level occurred using the 28S amplicon. Molecular techniques are therefore promising for HABs taxa detection but currently depend on deploying multiple markers for metabarcoding.
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    COVID-19 and threats to bats
    FACETS • Vol. 5 • No. 1 • pp. 349 - 352