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  • OPEN ACCESS
    Recent changes in the diet and survival of Atlantic puffin chicks in the face of climate change and commercial fishing in midcoast Maine, USA
    FACETS • Vol. 1 • pp. 27 - 43
    We examined the diet of Atlantic puffin (Fratercula arctica) chicks at three midcoast Maine, USA, colonies during the years 2005–2014 and found that the puffins at each island have a distinct diet that has changed in recent years. White hake (Urophycis tenuis) is by far the most frequently delivered prey at each island. Atlantic herring (Clupea harengus) is the second most frequently delivered food, but has declined in recent years on two islands. In contrast, butterfish (Poronotus triacanthus), haddock (Melanogrammus aeglefinus), and redfish (Sebastes spp.) have increased in the puffin diet on all islands. Chick condition declined significantly from 1993 to 2009. We demonstrate that puffin chicks with greater body weight experience a higher chance of postfledging survival as compared to chicks with lower body weight. The years 2012–2013 were a period of extreme sea surface warming, in which puffin hatching success and productivity sharply declined. This study provides new insight into changes in marine communities, examining changes in chick diet. We discuss our findings in relation to warming sea surface temperatures, recent climate-related decline in puffin productivity in the Gulf of Maine, and the impact of commercial fisheries on forage fish.
  • OPEN ACCESS
    Effect of water temperature on the hydrolysis of two absorbable sutures used in fish surgery
    FACETS • Vol. 1 • pp. 44 - 54
    Persistence of absorbable sutures in fishes in waters below 10 °C affects surgical decisions including approach, closure strategy, and suture selection. We hypothesized that the rate of suture hydrolysis would vary directly with water temperature. Two absorbable monofilament 3-0 suture materials used in fish surgery, poliglecaprone (Monocryl™) and polyglyconate (Maxon™), were evaluated. The maximum tensile load (strength) was measured for suture loops (n = 6) maintained in filtered city water for 2, 4, 6, or 8 weeks at 4, 25, or 37 °C. For Maxon™ at 4 or 25 °C, tensile strength did not decrease over time. However, for Monocryl™ at 4 °C, 2-, 4-, and 8-week loops were stronger than baseline loops. At 25 °C, tensile strength of the suture material declined after 2 weeks. Also, at 37 °C, the optimal design temperature for both suture materials, the strength of Maxon™ decreased at 6 and 8 weeks. Two 4-week loops of Monocryl™ disintegrated when handled, and after 6 and 8 weeks, all were untestable. This study confirms that absorbable sutures lose strength more slowly at ambient temperatures lower than the optimal design temperature (e.g., human body temperature) and will likely be retained longer in fishes living in waters below 25 °C.
  • OPEN ACCESS
    Building a common description of land cover in a tropical watershed plagued with intercultural conflicts: The value of participatory 3D modelling
    FACETS • Vol. 2 • pp. 195 - 211
    Natural forest management and conservation projects such as reducing emissions from deforestation and forest degradation, and enhancing forest carbon stocks (REDD+) face many challenges in the field. Implementation of these projects depends on such factors as clarity of information among stakeholders, legal security of territories, and local decision-making power. These challenges have been previously identified in the Upper Bayano watershed of eastern Panama, where a long history of land cover and land-use conflicts is present between three different human groups. With a long-term objective of natural forest conservation, this study aims to develop and test participatory approaches (participatory mapping and participatory 3D modelling) for the Upper Bayano watershed in an attempt to create a consensus among all stakeholders on current land cover and land-use conflicts to overcome challenges faced by projects as REDD+. We found that the third dimension allows a common understanding over the landscape, creates a common ground discussion, and leads towards a consensus, while the participatory approach brings discussion and positive effects among the stakeholders and the bridging institutions bring equity and transparency. Finally, we discuss implications of this knowledge generation and common agreement over the landscape for future forest management projects such as REDD+’s implementation.
  • OPEN ACCESS
    Testing unmanned aircraft systems for salmon spawning surveys
    FACETS • Vol. 1 • pp. 187 - 204
    Unmanned aircraft systems (UASs) were tested for counting Chinook salmon (Oncorhynchus tshawytscha) redds as a more accurate, safer alternative to manned helicopter flights. Counting redds from the helicopter was less expensive and time consuming, but of the total redds counted at selected sites with a UAS, an average (± SD) of only 77% ± 14% was counted from the helicopter. A river-wide census of redds was not possible with a UAS because the study area was too large for the single field crew to survey. Simulation analyses were used to compare stratified random sampling (STRS) and sampling proportional to size (PPS) for estimating annual total redd counts from data collected with a UAS. The STRS estimates were more accurate and precise, whereas the PPS estimates, though biased, had 95% CIs that included the observed redd count more frequently. We strongly recommend that researchers conduct simulation analyses to evaluate alternative survey sampling methods if they are considering replacing census counts made from manned aircraft with counts estimated from data collected with a UAS. We conclude that UAS application reduces the risk inherent to manned aircraft flights, but the reduction in risk can come at the cost of estimates of population parameters that can sometimes be inaccurate and lack 95% CI coverage.
  • OPEN ACCESS
    Variation in Zn, C, and N isotope ratios in three stream insects
    FACETS • Vol. 1 • pp. 205 - 216
    Total Zn concentrations and Zn isotope ratios were measured, using multicollector inductively coupled plasma (ICP)-mass spectrometry (MS), in three species of aquatic insects collected from a stream in Peterborough, Ontario, Canada. Total Zn levels averaged 193 ± 88 μg/g dry weight (dw) in water striders (Heteroptera: Gerridae, Aquarius remigis) and were significantly higher than the concentrations measured in stonefly nymphs (Plecoptera: Perlidae, Acroneuria abnormis) and caddisfly larvae (Trichoptera: Limnephilidae, Pycnopsyche guttifer), i.e., 136 ± 34 μg/g dw and 125 ± 26 μg/g dw, respectively. Average delta values for 66Zn/64Zn in the water striders were approximately 0.7‰ lighter (−1.2‰ ± 1.0‰) and were significantly different than those measured for stoneflies (−0.45‰ ± 0.62‰) and caddisflies (−0.51‰ ± 0.54‰). Nitrogen isotope ratios were significantly different (P < 0.05) among the three species suggesting differences in trophic positioning. Similar to the Zn isotope ratios, δ 13C values for the water striders (−28.61‰ ± 0.98‰) were significantly different than those of the stoneflies and caddisflies, i.e., −30.75‰ ± 1.33‰ and −30.68‰ ± 1.01‰, respectively. The data suggest that the differences observed in Zn ratios relate to food source for these insects. Similar to their carbon sources, Zn in water striders appears to be primarily of terrestrial origin, and of aquatic origin for the other two species.
  • OPEN ACCESS
    Recent advances in the study of mercury methylation in aquatic systems
    FACETS • Vol. 2 • pp. 85 - 119
    With increasing input of neurotoxic mercury to environments as a result of anthropogenic activity, it has become imperative to examine how mercury may enter biotic systems through its methylation to bioavailable forms in aquatic environments. Recent development of stable isotope-based methods in methylation studies has enabled a better understanding of the factors controlling methylation in aquatic systems. In addition, the identification and tracking of the hgcAB gene cluster, which is necessary for methylation, has broadened the range of known methylators and methylation-conducive environments. Study of abiotic factors in methylation with new molecular methods (the use of stable isotopes and genomic methods) has helped elucidate the confounding influences of many environmental factors, as these methods enable the examination of their direct effects instead of merely correlative observations. Such developments will be helpful in the finer characterization of mercury biogeochemical cycles, which will enable better predictions of the potential effects of climate change on mercury methylation in aquatic systems and, by extension, the threat this may pose to biota.
  • OPEN ACCESS
    Carbon cycle implications of terrestrial weathering changes since the last glacial maximum
    FACETS • Vol. 2 • pp. 267 - 285
    We examine the importance of the rock weathering feedback mechanism during the last deglacial period (∼16 000–4000 BCE) using an Earth system model of intermediate complexity (the University of Victoria Earth System Climate Model (UVic ESCM)) with four box-model parameterizations of terrestrial weathering. The deglacial climate change is driven by changes in orbital parameters, ice core reconstructions of atmospheric CO2 variability, and prescribed removal of continental ice sheets. Over the course of the 12 000 year simulation period, increases in weathering provide a mechanism that slowly removes CO2 from the atmosphere, in opposition to the observed atmospheric CO2 increase during this period. These processes transfer both carbon and alkalinity to the ocean, the combination of which results in as much as a 1000 Pg C increase in total ocean carbon, relative to a control simulation with constant weathering. However, the rapid expansion of northern hemisphere vegetation introduces a significant uncertainty among the weathering parameterizations. Further experiments to test the individual impacts of weathering dissolved inorganic carbon and alkalinity fluxes on ocean biogeochemistry suggest that the worldwide distribution of rock types and the ratio of carbonate to silicate weathering may be crucially important in obtaining an accurate estimate of changes in global weathering rates.
  • OPEN ACCESS
    Survey of mercury in boreal chorus frog (Pseudacris maculata) and wood frog (Rana sylvatica) tadpoles from wetland ponds in the Prairie Pothole Region of Canada
    FACETS • Vol. 2 • pp. 315 - 329
    Tadpoles are important prey items for many aquatic organisms and often represent the largest vertebrate biomass in many fishless wetland ecosystems. Neurotoxic mercury (Hg) can, at elevated levels, decrease growth, lower survival, and cause developmental instability in amphibians. We compared total Hg (THg) body burden and concentration in boreal chorus frog (Pseudacris maculata) and wood frog (Rana sylvatica) tadpoles. Overall, body burden and concentration were lower in boreal chorus frog tadpoles than wood frog tadpoles, as expected, because boreal chorus frog tadpoles consume at lower trophic levels. The variables species, stage, and mass explained 21% of total variation for body burden in our models but had negligible predictive ability for THg concentration. The vast majority of the remaining variation in both body burden and THg concentration was attributable to differences among ponds; tadpoles from ponds in three areas had considerably higher THg body burden and concentration. The pond-to-pond differences were not related to any water chemistry or physical parameter measured, and we assumed that differences in wetland geomorphology likely played an important role in determining Hg levels in tadpoles. This is the first report of Hg in frog tadpoles in the Prairie Pothole Region of North America.
  • OPEN ACCESS
    Genetic discontinuity in two high dispersal marine invertebrates in the northwest Atlantic
    FACETS • Vol. 2 • pp. 160 - 177
    Oceanic circulation patterns shape both the distribution of species and spatial patterns of intraspecific genetic variation by influencing passively dispersed marine invertebrates. In the northwest Atlantic, strong and consistent currents at the mouth of the Bay of Fundy are expected to restrict dispersal in this region, but the relationship between populations of high dispersal species along the surrounding coastal regions has been largely underrepresented in the phylogeographic literature. We analyzed phylogeographic patterns in two intertidal invertebrates with high dispersal abilities, Tritia obsoleta (Mollusca: Gastropoda) and Macoma petalum (Mollusca: Bivalvia), between Cape Cod and the Gulf of St. Lawrence using mitochondrial DNA (mtDNA). Hierarchical analysis of molecular variance revealed population structuring among regions defined by circulation patterns, highly divergent lineages within M. petalum, and strong concordant genetic subdivision in both species between the Bay of Fundy and Gulf of Maine. Our results suggest that the gyre at the mouth of the bay is influential in restricting alongshore dispersal, allowing genetic divergence between regions to arise through genetic drift. These findings are concordant with biogeographic and phylogeographic studies of other marine organisms, suggesting that the genetic isolation of widely distributed species may be a common feature of intertidal invertebrate communities in the Bay of Fundy.
  • OPEN ACCESS
    Analogues of glacial valley profiles in particle mechanics and in cosmology
    FACETS • Vol. 2 • pp. 286 - 300
    An ordinary differential equation describing the transverse profiles of U-shaped glacial valleys has two formal analogies, which we explore in detail, bridging these different areas of research. First, an analogy with point particle mechanics completes the description of the solutions. Second, an analogy with the Friedmann equation of relativistic cosmology shows that the analogue of a glacial valley profile is a universe with a future singularity of interest in theoretical models of cosmology. A Big Freeze singularity, which was not previously observed for positive curvature index, is also contained in the dynamics.
  • OPEN ACCESS
    Cautions on using the Before-After-Control-Impact design in environmental effects monitoring programs
    FACETS • Vol. 2 • pp. 212 - 232
    Often the Before-After-Control-Impact (BACI) design is suggested as being a statistically powerful experimental design in environmental impact studies. If the timing and location of the impact are known and adequate pre-data are collected, the BACI design is considered optimal to help isolate the effect of the development from natural variability. This paper presents 9 years of results from a long-term BACI experiment tested using a range of statistical models and post-impact monitoring designs. To explore suboptimal designs that are often utilized in environmental effects monitoring, the same data were also explored assuming either no control system was available (Before-After only), or that no pre-impact data were available (Control-Impact only). The results of the BACI design were robust to the statistical model used, and the BACI design was able to detect effects from the impact that the two suboptimal designs failed to detect. However, the BACI design demonstrated different conclusions depending on the number and configuration of post-impact years included in the analysis. Our results reinforce the idea that caution should be employed when using, or interpreting results from, a BACI design in an environmental impact study, but demonstrate that a well-designed BACI remains one of the best models for environmental effects monitoring programs.
  • OPEN ACCESS
    Changing nitrogen deposition with low δ15N−NH4+ and δ15N−NO3− values at the Experimental Lakes Area, northwestern Ontario, Canada
    FACETS • Vol. 2 • pp. 249 - 266
    Ammonium deposition at the International Institute for Sustainable Development Experimental Lakes Area (IISD–ELA), in northwestern Ontario, Canada, has doubled in the last 45 years and thus is no longer among the low nitrogen (N) deposition sites in North America. This may be related to the concurrent intensification of Manitoba agriculture to the west and upwind of the ELA. Large increases in ammonium deposition at the ELA were important in driving the observed trend and increased the NH4 + to NO3 − ratio of input to aquatic and terrestrial systems. Stable isotope analyses of two years of bulk (wet and dry) atmospheric deposition revealed very large ranges in δ15N−NH4 + (22‰ range), δ15N−NO3 − (18‰), and δ18O–NO3 − (19‰). Few other δ15N−NH4 +, δ15N−NO3 −, and δ18O–NO3 − values have been published for Canadian precipitation. Increases in δ15N of NH4 + and NO3 − in July occurred with increases in total N deposition. The wide range and seasonal trends of δ15N and δ18O values in ELA precipitation mean that studies characterizing N inputs to watersheds and lakes require an ongoing and comprehensive annual sampling regime. Global trends of declining δ15N of N deposition evident in lake sediment records may be a result of increases in NH4 + deposition with lower δ15N−NH4 + values. Similarly, the relationship in Lake Superior between increasing NO3 − and lower δ15N−NO3 − values may be explained by increased atmospheric deposition of N with low δ15N values.
  • OPEN ACCESS
    Altered acrylic acid concentrations in hard and soft corals exposed to deteriorating water conditions
    FACETS • Vol. 2 • pp. 531 - 544
    A reliable marker of early coral response to environmental stressors can help guide decision-making to mitigate global coral reef decline by detecting problems before the development of clinically observable disease. We document the accumulation of acrylic acid in two divergent coral taxa, stony small polyp coral (Acropora sp.) and soft coral (Lobophytum sp.), in response to deteriorating water quality characterized by moderately increased ammonia (0.25 ppm) and phosphate (0.15 ppm) concentrations and decreased calcium (360 ppm) concentration, using nuclear magnetic resonance spectroscopy (NMR)-based metabolomic techniques. Changes in acrylic acid concentration in polyp tissues free of zooxanthellae suggest that acrylic acid could be a product of animal metabolism and not exclusively a metabolic by-product of the osmolyte dimethylsulfoniopropionate (DMSP) in marine algae or bacteria. Our findings build on previously documented depletions of acrylic acid in wild coral potentially correlated to temperature stress and provide additional insight into approaches to further characterize the nature of the metabolic accumulation of acrylic acid under controlled experimental conditions.
  • OPEN ACCESS
    Microplastic abundance and distribution in the open water and sediment of the Ottawa River, Canada, and its tributaries
    FACETS • Vol. 2 • pp. 301 - 314
    Microplastic pollution is prevalent in the Ottawa River, with all open water samples (n = 62) and sediment samples (n = 10) containing microplastics. The median microplastic concentration of nearshore 100 L water samples was 0.1 fragments per L (ranged between 0.05 and 0.24 fragments per L). The larger volume Manta trawls samples taken in the middle of the Ottawa River had an overall mean concentration of plastics of 1.35 fragments per m3. Plastic concentrations were significantly higher downstream of the wastewater treatment plant (1.99 fragments per m3) compared with upstream of the effluent output (0.71 fragments per m3), suggesting that the effluent plume is a pathway for plastic pollution to the Ottawa River. The mean concentration of microplastic fragments recovered in the sediment samples was 0.22 fragments per g dry weight. The abundance of microplastics in the sediment was not significantly related to the mean particle size or the organic content of the sediment. The most common form of plastic particles found was microfibers. These made up between 70% and 100% of all plastic particles observed, although plastic microbeads and secondary plastic fragments were also recovered.
  • OPEN ACCESS
    First North American occurrences of Qiupalong (Theropoda: Ornithomimidae) and the palaeobiogeography of derived ornithomimids
    FACETS • Vol. 2 • pp. 355 - 373
    Ornithomimid material from the Belly River Group (Campanian) of Alberta, Canada is described as sharing characters with Qiupalong henanensis from the Qiupa Formation of Henan Province, China. Derived characters and character combinations of the pubis and astragalocalcaneum were previously used to diagnose Q. henanensis and support the referral of this material to Qiupalong sp., representing the first known occurrences of Qiupalong outside of China. Qiupalong is the sixth ornithomimid taxon to be reported from the Dinosaur Park Formation and the first ornithomimid genus with a transcontinental distribution. The Alberta material represents the oldest known occurrences of Qiupalong, and a reconsideration of character evidence suggests that this genus is phylogenetically nested within other North American ornithomimids. A North American origin for Qiupalong and subsequent dispersal to Asia is proposed.
  • OPEN ACCESS
    Criteria for a good catch: A conceptual framework to guide sourcing of sustainable salmon fisheries
    FACETS • Vol. 3 • No. 1 • pp. 300 - 314
    The identification of sustainably managed fisheries is problematic for marketers and consumers of Pacific salmon food products owing to lack of well-defined and robust criteria that take into account current ecosystem science of salmon. We present the rationale for an alternative conceptual framework for salmon management that supports the development of sustainable sourcing criteria. Our approach contrasts with current large-scale fisheries certification programs such as that of the Marine Stewardship Council (MSC) and general consumer recommendation services such as Monterey Bay Aquarium’s Seafood Watch (SFW) program. Our framework is based on the “place-based” character of salmon populations and recognition of fundamental aspects of salmon ecology, particularly the evolution of population life histories that are locally adapted to freshwater spawning and rearing habitats. We describe how this framework underpins development of science-based sourcing criteria and how it differs in important respects from the industrial approach that historically and currently is the basis for most salmon management. We conclude with a discussion of how the framework and its application may provide a model for redirecting salmon management, in general, towards a more science- and place-based approach and why that is likely to be sustainable in the long term in a way that most contemporary salmon management is not.
  • OPEN ACCESS
    A paleolimnological archive of metal sequestration and release in the Cumberland Basin Marshes, Atlantic Canada
    FACETS • Vol. 2 • pp. 440 - 460
    We used a paleolimnological approach at Long Lake, Nova Scotia, to construct a 10 500-year record of metal deposition in lakebed sediments and elucidate the influence of both natural and anthropogenic environmental changes. Aquatic sediment concentrations of mercury (Hg), arsenic (As), and chromium (Cr) in Long Lake fluctuated substantially and, during some periods, exceeded guidelines for the protection of aquatic life. Increases in lead (Pb), Hg, Cr, trace metals, and nitrogen stable isotopes (δ15N) were broadly coincident with a period of widespread drying from ca. 8000 to 4000 cal BP and were likely a consequence of regional fires. From ca. 4000 cal BP until 1700 AD, metal levels in general were low due to decreased erosion, increased precipitation, and reduced fire activity. Water level lowering and forced sediment aggradation (tiding) in the 1800s led to increases in minerogenic Pb and Cr, though fossil fuel combustion also likely contributed to total Pb concentrations. Stratigraphic proxies indicated increased inorganic sedimentation rates, and reduced autochthonous productivity were coincident with lower Hg and As concentrations in the Long Lake sediment. Our data indicate that natural phenomena (fire) can result in sediment contaminant exceedances, that most metals have multiple sources, and that both human-induced disturbance and emissions have contributed to Pb contamination in the last 200 years. In addition, wetter and generally cooler climate appeared to favour lower concentrations of contaminants in lake sediments. Although wetland sediments in the Cumberland Basin Marshes are not heavily polluted with metals, the development of constructed wetlands and the disruption of aquatic sediments have the potential to concentrate, mobilize, and increase the bioavailability of metals.
  • OPEN ACCESS
    Reproductive investment in Atlantic cod populations off Newfoundland: Contrasting trends between males and females
    FACETS • Vol. 2 • pp. 660 - 681
    Life history theory predicts selection for higher reproductive investment in response to increased mortality among mature individuals. We tested this prediction over the period from 1978 to 2013 for three populations of Atlantic cod (Gadus morhua) off Newfoundland. These populations were heavily fished for a long period. We considered changes in standardized gonad weight as a proxy for changes in gonadal investment. We accounted for the allometry between gonad and body weight, individual body condition, water temperature, and potential spatial and density-dependent effects. Males display significant temporal trends in gonadal investment in all populations; in agreement with theoretical predictions, these trends show increased gonadal investments during the earlier part of the time series when mortality was high, with the trends leveling off or reversing after the later imposition of fishing moratoria. In contrast, females display patterns that are less consistent and expected; significant trends are detected only when accounting for density-dependent effects, with females in two populations unexpectedly showing a long-term decline in gonadal investment. Our results support the hypothesis that fisheries-induced evolution has occurred in gonadal investment in males, but not in females, and suggest that gonadal investment is more important for male reproductive success than expected in this lekking species.
  • OPEN ACCESS
    Microplastics in the gastrointestinal tracts of fish and the water from an urban prairie creek
    FACETS • Vol. 2 • pp. 395 - 409
    Microplastics are defined as any plastic with a diameter ≤5 mm. Problems associated with these plastics such as contamination of both marine and freshwater environments and ingestion by aquatic organisms are of increasing concern. Our study quantifies the number of microplastics in a prairie creek immediately downstream of Regina, Saskatchewan, Canada. Water samples and five species of fish were collected from sample sites upstream and downstream of a wastewater treatment plant (WWTP) in the summers of 2015 and 2016. Samples were digested in either a Fe(II)/H2O2 or NaClO solution and observed under a microscope where plastics present were enumerated by colour and type. At least one microplastic was detected in 73.5% of fish and 95.6% of water samples, showing that the creek does, in fact, contain microplastics. Concentrations were higher in water from upstream sites, likely due to dilution of creek water by the release of treated effluent. The results of this study provide baseline conditions for the presence of plastics in the creek prior to a major upgrade of the WWTP scheduled for completion in 2016.
  • OPEN ACCESS
    Strategies to prevent damage to critical infrastructure due to induced seismicity
    FACETS • Vol. 2 • pp. 374 - 394
    There has been a significant increase in the rate of felt earthquakes in western Alberta and eastern British Columbia, which has been associated with hydraulic fracturing and wastewater disposal. The increased rate of seismicity and the potential for localized strong ground motions from very shallow events poses an increased hazard to critical infrastructure such as major dams—particularly for older high-consequence structures. This paper overviews the factors that affect the likelihood of damaging ground motions and examines their implications for hazard assessment and mitigation. A strategy aimed at reducing the likelihood of potentially damaging ground motions to achieve probabilistic targets for critical facilities is developed, comprising elements of both mitigation and avoidance. For critical facilities, an effective strategy includes (i) an exclusion zone having a radius of ∼5 km; and (ii) a monitoring-and-response protocol to track the rate of events at the M > 2 level within 25 km, with adjustment of operational practices if required. An exclusion zone provides a deterministic safety margin to ensure the integrity of those few facilities for which failure consequences are unacceptable. Real-time monitoring tied to a response protocol can be used to control the rate of significant events and thereby limit the hazard more broadly.
  • OPEN ACCESS
    Host–parasite transcriptomics during immunostimulant-enhanced rejection of salmon lice (Lepeophtheirus salmonis) by Atlantic salmon (Salmo salar)
    FACETS • Vol. 2 • pp. 477 - 495
    Salmon lice (Lepeophtheirus salmonis) are important ectoparasites of wild and farmed salmonids and cause major losses to the salmon farming industry throughout the Northern Hemisphere. With the emergence of resistance to several commonly used parasiticides, novel control strategies and integration of multiple treatment options are needed, including host immunostimulation. Here, we investigate the effects of a functional feed containing a peptidoglycan and nucleotide formulation on L. salmonis infection of Atlantic salmon (Salmo salar) by characterizing lice infection levels, the expression of several host immune genes, and the parasite transcriptomic response to the immunostimulated host. Although initial infection intensities were low, the low dose (LD) immunostimulant diet reduced the total lice burden by 50% relative to controls. Immunostimulant fed hosts up-regulated interleukin-1β in the skin and spleen. This gene has been implicated in successful responses of several salmonid species to salmon lice but is typically not observed in Atlantic salmon, suggesting a favorable influence on the immune response. Lice infecting LD immunostimulated salmon overexpressed genes putatively involved in parasite immunity, including carboxylesterases, and underexpressed genes putatively involved in feeding (e.g., proteases). These lice response genes further improve the characterization of the transcriptome of the non-model parasite by identifying genes potentially involved in evading host immunity.
  • OPEN ACCESS
    Using a linked table-based structure to encode self-describing multiparameter spatiotemporal data
    FACETS • Vol. 3 • No. 1 • pp. 326 - 337
    Multiparameter data with both spatial and temporal components are critical to advancing the state of environmental science. These data and data collected in the future are most useful when compared with each other and analyzed together, which is often inhibited by inconsistent data formats and a lack of structured documentation provided by researchers and (or) data repositories. In this paper we describe a linked table-based structure that encodes multiparameter spatiotemporal data and their documentation that is both flexible (able to store a wide variety of data sets) and usable (can easily be viewed, edited, and converted to plottable formats). The format is a collection of five tables (Data, Locations, Params, Data Sets, and Columns), on which restrictions are placed to ensure data are represented consistently from multiple sources. These tables can be stored in a variety of ways including spreadsheet files, comma-separated value (CSV) files, JavaScript object notation (JSON) files, databases, or objects in a software environment such as R or Python. A toolkit for users of R statistical software was also developed to facilitate converting data to and from the data format. We have used this format to combine data from multiple sources with minimal metadata loss and to effectively archive and communicate the results of spatiotemporal studies. We believe that this format and associated discussion of data and data storage will facilitate increased synergies between past, present, and future data sets in the environmental science community.
  • OPEN ACCESS
    Increased size and relative abundance of migratory fishes observed near the Athabasca oil sands
    FACETS • Vol. 2 • pp. 833 - 858
    Responses to chemical and physical stressors are commonly expected among organisms residing near the Athabasca oil sands. Physiological effects have been observed in fishes during field studies; but further effects associated with development are not clear or consistent among species. For instance, data from a fish fence in 2009 show declines in the relative abundances of some species, including Arctic grayling (Thymallus arcticus). In contrast, increases were seen in white sucker (Catostomus commersoni). This divergence suggests incomplete understanding of the status of fishes residing near the oil sands. However, an important challenge limiting understanding is the lack of reliable baseline or reference data. To overcome this challenge, we used iterative normal ranges and a historical data set (electrofishing surveys done from 1987 to 2014) to determine if changes have occurred in fishes captured in the lower Athabasca River. These analyses revealed clear increases in the lengths of white sucker and walleye (Sander vitreus) and their relative abundances during the spawning season. The occurrence of these changes may be associated with overwintering location, but reduced fishing pressure in Lake Athabasca, eutrophication, or a cumulative effect may explain the form of changes detected in this study.
  • OPEN ACCESS
    DIY meteorology: Use of citizen science to monitor snow dynamics in a data-sparse city
    FACETS • Vol. 2 • pp. 734 - 753
    Cities are under pressure to operate their services effectively and project costs of operations across various timeframes. In high-latitude and high-altitude urban centers, snow management is one of the larger unknowns and has both operational and budgetary limitations. Snowfall and snow depth observations within urban environments are important to plan snow clearing and prepare for the effects of spring runoff on cities’ drainage systems. In-house research functions are expensive, but one way to overcome that expense and still produce effective data is through citizen science. In this paper, we examine the potential to use citizen science for snowfall data collection in urban environments. A group of volunteers measured daily snowfall and snow depth at an urban site in Saskatoon (Canada) during two winters. Reliability was assessed with a statistical consistency analysis and a comparison with other data sets collected around Saskatoon. We found that citizen-science-derived data were more reliable and relevant for many urban management stakeholders. Feedback from the participants demonstrated reflexivity about social learning and a renewed sense of community built around generating reliable and useful data. We conclude that citizen science holds great potential to improve data provision for effective and sustainable city planning and greater social learning benefits overall.
  • OPEN ACCESS
    Knowledge sharing about deep-sea ecosystems to inform conservation and research decisions
    FACETS • Vol. 2 • pp. 984 - 997
    The Marianas Trench Marine National Monument (MNM) currently extends policy-based protection to deep-sea ecosystems contained within it, but managers require better understanding of the current knowledge and knowledge gaps about these ecosystems to guide decision-making. To address this need, we present a case study of the Marianas Trench MNM using in-depth interviews to determine scientists’ (1) current understanding of anthropogenic drivers of change and system vulnerability in deep-sea ecosystems; and (2) perceptions of the least understood deep-sea ecosystems and processes in the Marianas Trench MNM, and which of these, if any, should be research priorities to fill knowledge gaps about these systems and the impacts from anthropogenic drivers of change. Interview respondents shared similar views on the current knowledge of deep-sea ecosystems and potential anthropogenic drivers of change in the Marianas Trench MNM. Respondents also identified trench and deep pelagic (bathyal, abyssal, and hadal zones) ecosystems as the least understood, and highlighted climate change, litter and waste, mining and fishing, and interactions between these drivers of change as critical knowledge gaps. To fill key knowledge gaps and inform conservation decision-making, respondents identified the need for monitoring networks and time-series data. Our approach demonstrates how in-depth interviews can be used to elicit knowledge to inform decision-making in data-limited situations.
  • OPEN ACCESS
    Impacts of hypoxia on estuarine macroinvertebrate assemblages across a regional nutrient gradient
    FACETS • Vol. 3 • No. 1 • pp. 23 - 44
    In this study, we examined the effects of dissolved oxygen, via metrics based on hourly measurements, and other environmental variables on invertebrate assemblages in estuaries spanning a gradient of nutrient loading and geography in the southern Gulf of St. Lawrence, Canada. Upper areas (15–25 practical salinity units (PSU)) of 13 estuaries that were dominated by either seagrass (Zostera marina Linnaeus, 1753) or macroalgae (Ulva spp. Linnaeus, 1753) were sampled from June to September 2013. Macroinvertebrate assemblages from Z. marina were found to be distinct from Ulva assemblages for both epifauna and infauna. Small snails dominated each vegetation type, specifically cerithids in Z. marina and hydrobids in Ulva. Although Z. marina had higher species richness, approximately 70% of species were common to both habitats. Faunal communities differed among estuaries with large, within-estuary, temporal variance only observed at Ulva sites impacted by hypoxia and particularly at sites with long water residence time. Indeed, abundances varied by several orders of magnitude in Ulva ranging from zero to thousands of macroinvertebrates. There was a strong negative correlation between hypoxic or anoxic water, 48 h prior to sampling, with relative abundances of amphipods, and a positive correlation with the relative abundances of snails. As one of the first studies to use high-frequency oxygen monitoring, this study revealed probable impacts and the transient nature of hypoxia in eutrophication.
  • OPEN ACCESS
    Underwater optical environment in the coastal waters of British Columbia, Canada
    FACETS • Vol. 2 • pp. 872 - 891
    We describe the underwater light field of the Strait of Georgia in spring and summer, using apparent optical properties (reflectance, attenuation coefficient of downwelling irradiance, the average cosine of downwelling irradiance, and the attenuation of scalar irradiance). Both the attenuation and reflectance of photosynthetically available radiation (PAR; 400–700 nm) are highest in the turbid waters of the Fraser River plume, due to scattering by mainly inorganic particles and absorption by coloured dissolved organic matter, phytoplankton, and other organic particles. Light is most diffuse in the surface waters of the plume and least diffuse at depth and away from the plume. Throughout the Strait, blue and red wavelengths are attenuated most rapidly resulting in a green peak of reflectance, the portion of the electromagnetic spectrum that penetrates the most deeply. PAR is attenuated to 1% of its surface intensity within 6–22 m in the spring and 4–23 m in the summer. For red and blue light, the depth of 1% penetration is never deeper than 9 m. All of the visible radiation, with the exception of some green light, is absorbed within the outflowing layer (15–30 m) that is exported from the Strait with the estuarine circulation. The rapid extinction of light helps to explain the very shallow distribution of phytoplankton.
  • OPEN ACCESS
    The effect of global climate change on the future distribution of economically important macroalgae (seaweeds) in the northwest Atlantic
    FACETS • Vol. 3 • No. 1 • pp. 275 - 286
    An increase in greenhouse gas emissions has led to a rise in average global air and ocean temperatures. Increased sea surface temperatures can cause changes in species’ distributions, particularly those species close to their thermal tolerance limits. We use a bioclimate envelope approach to assess potential shifts in the range of marine macroalgae harvested in North American waters: rockweed (Fucus vesiculosus Linnaeus, 1753), serrated wrack (Fucus serratus Linnaeus, 1753), knotted wrack (Ascophyllum nodosum (Linnaeus) Le Jolis, 1863), carrageen moss (Chondrus crispus Stackhouse, 1797), and three kelp species (Laminaria digitata (Hudson) J.V. Lamouroux, 1813; Saccharina latissima (Linnaeus) C.E. Lane, C. Mayes, Druehl et G.W. Saunders, 2006; and Saccharina longicruris (Bachelot de la Pylaie) Kuntze, 1891). We determined species’ thermal limits from the current sea surface temperatures associated with their geographical distributions. Future distributions were based on sea surface temperatures projected for the year ∼2100 by four atmosphere-ocean general circulation models and earth system models for regional concentration pathways (RCPs) 4.5 and 8.5. Future distributions based on RCP 8.5 indicate that the presence of all but rockweed (F. vesiculosus) is likely to be threatened by warming waters in the Gulf of St. Lawrence and along the Atlantic coast of Nova Scotia. Range retractions of macroalgae will have significant ecological and economic effects including impacts on commercial fisheries and harvest rates and losses of floral and faunal biodiversity and production, and should be considered in the designation of marine protected areas.
  • OPEN ACCESS
    A critique of Hubbert’s model for peak oil
    FACETS • Vol. 3 • No. 1 • pp. 260 - 274
    In 1956, Shell Oil Company geologist M. King Hubbert published a model for the growth and decline over time of the production rates of oil extracted from the land mass of the continental US. Employing an estimate for the amount of ultimately recoverable oil and a logistic curve for the oil production rate, he accurately predicted a peak in US oil production for 1970. His arguments and the success of his prediction have been much celebrated, and the original paper has 1400 publication citations to date. The theory of “peak oil” (and subsequently, of natural resource scarcity in general) has consequently become associated with Hubbert and “Hubbert” curves and models. However, his prediction for the timing of a world peak oil production rate and the subsequent predictions of many others have proven inaccurate. We revisit the Hubbert model for oil extraction and provide an analysis of it and several variants in the language of (time) autonomous differential equations.
  • OPEN ACCESS
    Diversity in geoscience: Participation, behaviour, and the division of scientific labour at a Canadian geoscience conference
    FACETS • Vol. 3 • No. 1 • pp. 415 - 440
    Effective policies promoting diversity in geoscience require understanding of how the values and practices of the community support the inclusion of different social groups. As sites of knowledge exchange and professional development, academic conferences are important culturing institutions that can alleviate or reproduce barriers to diversity in geoscience. This study examines diversity at a 2017 geoscience conference, the joint Canadian Geophysical Union and Canadian Society of Agricultural and Forest Meteorology annual meeting, through observation of participation, presentation content, and behaviour in conference sessions. Across 256 observed presentations, women constituted 28% of speakers, whereas women of colour made up only 5%. Participation rates differed between disciplinary sections, with the most populous sessions (Hydrology and Earth Surface) having the lowest percentage of women. Examination of presentation content reveals that the methods and scholarly contributions of both women and people of colour differed from the majority, suggesting an intellectual division of labour in geoscience. Examination of audience behaviours between presenters reveals how a “chilly climate” can be experienced by women and other marginalized demographics in conferences. We argue that there is more to be done than simply increasing numbers of women or other minorities in geoscientific spaces, and we suggest pathways to making geoscience a more inclusive and democratic pursuit.
  • OPEN ACCESS
    A comparison of infectious agents between hatchery-enhanced and wild out-migrating juvenile chinook salmon (Oncorhynchus tshawytscha) from Cowichan River, British Columbia
    FACETS • Vol. 3 • No. 1 • pp. 695 - 721
    Infectious diseases are likely contributing to large-scale declines in chinook salmon stocks in the Pacific Northwest, but the specific agents and diseases involved, and the prevalences in migratory salmon, are mostly unknown. We applied a high-throughput microfluidics platform to screen for 45 infectious agents in 556 out-migrating juvenile chinook salmon, collected from freshwater (FW) and saltwater (SW) locations in the Cowichan River system on Vancouver Island, Canada, during 2014. Nineteen agents (5 bacterial, 2 viral, and 12 parasitic) were detected, with prevalences ranging from 0.2% to 57.6%. Co-infections between Candidatus Branchiomonas cysticola Toenshoff, Kvellestad, Mitchell, Steinum, Falk, Colquhoun & Horn, 2012, Paranucleospora theridion Nylund, Nylund, Watanabe, Arnesen & Kalrsbakk, 2010, and gill chlamydia, all associated with gill disease, were observed in SW samples. We detected agents known to cause large-scale mortalities in Pacific salmon (Ceratonova shasta (Noble, 1950), Parvicapsula minibicornis Kent, Whitaker & Dawe, 1977), and agents only recently reported in Pacific salmon in BC (Ca. B. cysticola, P. theridion, Facilispora margolisi Jones, Prosperi-Porta & Kim, 2012 and Parvicapsula pseudobranchicola Karlsbakk, Saether, Hostlund, Fjellsoy & Nylund, 2002). Wild and hatchery fish were most divergent in agent profiles in FW, with higher agent diversity in wild fish. Differences in prevalence largely dissipated once they converged in the marine environment, although hatchery fish may be infected by a greater diversity of agents sooner after ocean entry by virtue of their more rapid migration from nearshore to offshore environments.
  • OPEN ACCESS
    Nickel geochemistry of oil sands fluid petroleum coke deposits, Alberta, Canada
    FACETS • Vol. 3 • No. 1 • pp. 469 - 486
    Nickel (Ni) leaching from oil sands petroleum coke can have toxicological effects on aquatic organisms. However, geochemical controls on Ni release, transport, and attenuation within coke deposits remains limited. We examined the geochemistry of fluid coke and associated pore waters from two deposits at an oil sands mine near Fort McMurray, Alberta, Canada. Synchrotron-based micro-X-ray fluorescence (μXRF) and micro-X-ray absorption near edge structure (μXANES) spectroscopy show that Ni(II)-porphyrin complexes dominate, but inorganic phases including Ni(II)-sulfide and Ni(II)-oxide comprise a minor component of fluid coke. Sequential chemical extractions suggested that sorption–desorption reactions may influence Ni mobility within fluid coke deposits. Although only a small proportion of total Ni (<4%) is susceptible to leaching under environmentally relevant concentrations, dissolved Ni concentrations (n = 65) range from 2 to 120 μg·L−1 (median 7.8 μg·L−1) within the two deposits and generally decrease with depth below the water table. Pore water Ni concentrations are negatively correlated with pH, but not with dissolved sulfate, bicarbonate, or chloride. Overall, our findings suggest that pore water pH and sorption–desorption reactions are principal controls on dissolved Ni concentrations within oil sands fluid petroleum coke deposits.
  • OPEN ACCESS
    Exaggerated expectations in ancient starch research and the need for new taphonomic and authenticity criteria
    FACETS • Vol. 3 • No. 1 • pp. 777 - 798
    Ancient starch research illuminates aspects of human ecology and economic botany that drove human evolution and cultural complexity over time, with a special emphasis on past technology, diet, health, and adaptation to changing environments and socio-economic systems. However, lapses in prevailing starch research demonstrate the exaggerated expectations for the field that have been generated over the last few decades. This includes an absence of explanation for the millennial-scale survivability of a biochemically degradable polymer, and difficulties in establishing authenticity and taxonomic identification. This paper outlines new taphonomic and authenticity criteria to guide future work toward designing research programs that fully exploit the potential of ancient starch while considering growing demands from readers, editors, and reviewers that look for objective compositional identification of putatively ancient starch granules.
  • OPEN ACCESS
    The same strain of Piscine orthoreovirus (PRV-1) is involved in the development of different, but related, diseases in Atlantic and Pacific Salmon in British Columbia
    FACETS • Vol. 3 • No. 1 • pp. 599 - 641
    Piscine orthoreovirus Strain PRV-1 is the causative agent of heart and skeletal muscle inflammation (HSMI) in Atlantic salmon (Salmo salar Linnaeus, 1758). Given its high prevalence in net pen salmon, debate has arisen on whether PRV poses a risk to migratory salmon, especially in British Columbia (BC) where commercially important wild Pacific salmon are in decline. Various strains of PRV have been associated with diseases in Pacific salmon, including erythrocytic inclusion body syndrome (EIBS), HSMI-like disease, and jaundice/anemia in Japan, Norway, Chile and Canada. We examined the developmental pathway of HSMI and jaundice/anemia associated with PRV-1 in farmed Atlantic and chinook (Oncorhynchus tshawytscha (Walbaum, 1792)) salmon in BC, respectively. In situ hybridization localized PRV-1 within developing lesions in both diseases. The two diseases showed dissimilar pathological pathways, with inflammatory lesions in heart and skeletal muscle in Atlantic salmon and degenerative-necrotic lesions in kidney and liver in chinook salmon, plausibly explained by differences in PRV load tolerance in red blood cells. Viral genome sequencing revealed no consistent differences in PRV-1 variants intimately involved in the development of both diseases suggesting that migratory chinook salmon may be at more than a minimal risk of disease from exposure to the high levels of PRV occurring in salmon farms.
  • OPEN ACCESS
    Shining light on recent advances in microbial mercury cycling
    FACETS • Vol. 3 • No. 1 • pp. 858 - 879
    Mercury (Hg) is a global pollutant emitted primarily as gaseous Hg0 that is deposited in aquatic and terrestrial ecosystems following its oxidation to HgII. From that point, microbes play a key role in determining Hg’s fate in the environment by participating in sequestration, oxidation, reduction, and methylation reactions. A wide diversity of chemotrophic and phototrophic microbes occupying oxic and anoxic habitats are known to participate directly in Hg cycling. Over the last few years, new findings have come to light that have greatly improved our mechanistic understanding of microbe-mediated Hg cycling pathways in the environment. In this review, we summarize recent advances in microbially mediated Hg cycling and take the opportunity to compare the relatively well-studied chemotrophic pathways to poorly understood phototrophic pathways. We present how the use of genomic and analytical tools can be used to understand Hg transformations and the physiological context of recently discovered cometabolic Hg transformations supported in anaerobes and phototrophs. Finally, we propose a conceptual framework that emphasizes the role that phototrophs play in environmental Hg redox cycling and the importance of better characterizing such pathways in the face of the environmental changes currently underway.
  • OPEN ACCESS
    Age matters: Submersion period shapes community composition of lake biofilms under glyphosate stress
    FACETS • Vol. 3 • No. 1 • pp. 934 - 951
    The phosphonate herbicide glyphosate, which is the active ingredient in the commercial formulation Roundup®, is currently the most globally used herbicide. In aquatic ecosystems, periphytic biofilms, or periphyton, are at the base of food webs and are often the first communities to be in direct contact with runoff. Microcosm experiments were conducted to assess the effects of a pulse exposure of glyphosate on community composition and chlorophyll a concentrations of lake biofilms at different colonization stages (2 months, 1 year, and 20 years). This is the first study that uses such contrasting submersion periods. Biofilms were exposed to either environmental levels of pure analytical grade glyphosate (6 μg/L, 65 μg/L, and 600 μg/L) or to corresponding phosphorus concentrations. Community composition was determined by deep sequencing of the 18S and 16S rRNA genes to target eukaryotes and cyanobacteria, respectively. The results showed that submersion period was the only significant contributor to community structure. However, at the taxon level, the potentially toxic genus Anabaena was found to increase in relative abundance. We also observed that glyphosate releases phosphorus into the surrounding water, but not in a bioavailable form. The results of this study indicate that environmental concentrations of glyphosate do not seem to impact the community composition or metabolism of lake biofilms under pulse event conditions.
  • OPEN ACCESS
    Uptake and trophic changes in polybrominated diphenyl ethers in the benthic marine food chain in southwestern British Columbia, Canada
    FACETS • Vol. 4 • No. 1 • pp. 20 - 51
    We examined the physical and geochemical effects of sediment on the uptake of polybrominated diphenyl ethers (PBDEs) into marine sediment feeders and their transfer to higher trophic fauna. Sediment PBDEs increased with % total organic carbon (%TOC), organic carbon (OC) flux and grain size (%fines). Tissue PBDE variance was best explained (R2 = 0.70) by sediment acid volatile sulfides (AVS), PBDEs, and organic lability and input, with the highest values near wastewater outfalls. Dry weight tissue/sediment PBDEs declined with increasing sediment PBDEs, resulting in tissue dilution (ratio <1) at >10 000 pg/g in harbours. Ratios also decreased with increasing %fines, resulting in regional differences. These patterns imply that high levels of fines and high sediment concentrations make PBDEs less bioavailable.Dry weight PBDEs increased >100× between background deposit feeders and predators (polychaetes, crabs, bottom fish, seal), but lipid normalized PBDEs barely increased (<1.3%), suggesting remarkably high uptake in low-lipid sediment feeders, and that PBDEs don’t accumulate at higher trophic levels, but lipid content does. Filter feeders had lower lipid-normalized PBDEs than deposit feeders, highlighting the importance of food resources in higher trophic fauna for bioaccumulation.The most profound congener change occurred with sediment uptake, with nona/deca-BDEs declining and tetra-hexa-BDEs increasing. Harbour sediment feeders had more deca-BDEs than other samples, suggesting PBDEs mostly pass unmodifed through them. Deca-BDEs persist patchily in all tissues, reflecting variable dependence on sediment/pelagic food.
  • OPEN ACCESS
    Could a residential wood ash recycling programme be part of the solution to calcium decline in lakes and forests in Muskoka (Ontario, Canada)?
    FACETS • Vol. 4 • No. 1 • pp. 69 - 90
    One possible solution to the recent decline of calcium (Ca) concentrations in Canadian Shield forests and lakes in eastern North America is the addition of Ca-rich wood ash to watersheds. We investigated the feasibility of using small, mainly residential sources of non-industrial wood ash (NIWA) for this purpose by quantifying concentrations of its major nutrients and metals, its toxicity to Daphnia in aqueous extracts, and estimating the amount of NIWA available in the District of Muskoka in central Ontario. Locally collected NIWA averaged 30% Ca, and also contained smaller but significant amounts of K, Mg, Na, and P. Of these, K was so soluble that it was toxic to Daphnia over 48 h in the concentrate and 10-fold dilution; however, sedimented ash was not toxic over 15 d. Most metal levels in NIWA were below targets permitting unrestricted land application. However, Cu and Zn were just above these targets, but well below those for conditional use. Muskoka residents generate about 235 000 kg of NIWA annually, not enough to treat all central Ontario areas affected; however, a NIWA recycling programme implemented across southern Ontario could generate enough ash to solve the Ca decline problem in Muskoka’s forests and lakes.
  • OPEN ACCESS
    Seasonal patterns in deep acoustic backscatter layers near vent plumes in the northeastern Pacific Ocean
    FACETS • Vol. 4 • No. 1 • pp. 183 - 209
    We used moored 75 kHz acoustic Doppler current profilers (ADCPs) to examine seasonal cycles in zooplankton deep scattering layers (DSLs) observed below 1300 m depth at Endeavour Ridge hydrothermal vents. DSLs are present year-round in the lower water column near vent plumes. Temporal variations suggest passive, flow-induced displacements superimposed on migratory movements. Although the strongest DSLs are shallower than the neutrally buoyant plumes (1900–2100 m), anomalies also occur at and below plume depth. Upward movement from plume depth in the main DSL is evident in late summer/fall, resulting in shallower DSLs in winter, consistent with the timing of adult diapause/reproduction in upper-ocean migratory copepods. Movement from the upper ocean to plume depth coincides with pre-adult migration to greater depths in spring. Synchronous 20–40 d cycles in DSLs may account for patchiness in space and time of above-plume zooplankton layers observed in summer during previous net-sampling surveys, and suggests lateral and vertical migratory movements to counter current drift away from plume-derived food sources. Persistent near-bottom DSLs move vertically between the spreading plume and seafloor. Historical net data suggests that these are deep, resident fauna. Unlike upper ocean fauna, they seem to be advected considerable distances from the ridge axis, where they are evident as remnant scattering layers.
  • OPEN ACCESS
    Quantifying the fate of wastewater nitrogen discharged to a Canadian river
    FACETS • Vol. 4 • No. 1 • pp. 315 - 335
    Addition of nutrients, such as nitrogen, can degrade water quality in lakes, rivers, and estuaries. To predict the fate of nutrient inputs, an understanding of the biogeochemical cycling of nutrients is needed. We develop and employ a novel, parsimonious, process-based model of nitrogen concentrations and stable isotopes that quantifies the competing processes of volatilization, biological assimilation, nitrification, and denitrification in nutrient-impacted rivers. Calibration of the model to nitrogen discharges from two wastewater treatment plants in the Grand River, Ontario, Canada, show that ammonia volatilization was negligible relative to biological assimilation, nitrification, and denitrification within 5 km of the discharge points.
  • OPEN ACCESS
    Science should not be left behind during the design of a marine protected area: meeting conservation priorities while integrating stakeholder interests
    FACETS • Vol. 4 • No. 1 • pp. 472 - 492
    Marine protected areas (MPAs) design is a complex process that typically involves diverse stakeholders, requiring compromise between diverging priorities. Such compromises, when not carefully understood, can threaten the ecological effectiveness of MPAs. Using the example of the Canadian Laurentian Channel MPA, we studied a planning process from initial scientific advice to the final MPA. We analysed the impacts of successive boundary modifications to the draft MPA, often made to accommodate extractive industries, on the protection of seven species initially identified as potential conservation priorities. We also quantified the potential economic impacts of changes in boundary modifications on the fisheries industry. Results show that reducing the proposed MPA size by 33.4% helped reduce the potential economic impact on the fishing industry by 65.5%, but it resulted in up to 43% decrease in protection of species of conservation priority. Changes in MPA boundary delineation during the design were not subjected to formal scientific reviews, raising questions on the potential effectiveness of this MPA. Better integration of science in MPA design is required to help assess the impacts that trade-offs made during stakeholder consultations can have on the MPA ecological effectiveness.
  • OPEN ACCESS
    Channel geomorphology differences between stream reaches with grass- or tree-dominated riparian vegetation in southern Manitoba
    FACETS • Vol. 4 • No. 1 • pp. 336 - 349
    Removal of trees for pasture or crop production is common along the stream reaches in the Canadian Prairies, resulting in a patchwork of forested and nonforest riparian vegetation along most streams. The effect of vegetation type on channel geomorphology and potential to influence sediment dynamics was studied using eight paired reaches (forested and nonforest) within agricultural watersheds in southern Manitoba, Canada. High potential for bank erosion was observed at all sites (bank erosion hazard index scores), but Pfankuch channel stability scores were significantly higher for forested reaches compared with nonforested reaches. Furthermore, forested reaches had higher width to depth ratios, but flood-prone widths did not differ significantly, resulting in lower entrenchment ratios. Reduced channel width and cross-sectional area in nonforested reaches created an overall reduction of in-stream habitat, increased velocity, and increased potential for exceedance of channel capacity and floodplain access during high-flow events. Channel widening in response to riparian afforestation efforts has been observed in a variety of other locations globally and the results of this study suggest that widening with afforestation can still be anticipated in this region where stream gradients are low, hydrology is dominated by snowmelt, and forest cover is minimal.
  • OPEN ACCESS
    Recommended best practices for plastic and litter ingestion studies in marine birds: Collection, processing, and reporting
    FACETS • Vol. 4 • No. 1 • pp. 111 - 130
    Marine plastic pollution is an environmental contaminant of significant concern. There is a lack of consistency in sample collection and processing that continues to impede meta-analyses and large-scale comparisons across time and space. This is true for most taxa, including seabirds, which are the most studied megafauna group with regards to plastic ingestion research. Consequently, it is difficult to evaluate the impacts and extent of plastic contamination in seabirds fully and accurately, and to make inferences about species for which we have little or no data. We provide a synthesized set of recommendations specific for seabirds and plastic ingestion studies that include best practices in relation to sample collection, processing, and reporting, as well as highlighting some “cross-cutting” methods. We include guidance for how carcasses, regurgitations, and pellets should be handled and treated to prevent cross-contamination, and a discussion of what size class of microplastics can be assessed in each sample type. Although we focus on marine bird samples, we also include standardized techniques to remove sediment and biological material that are generalizable to other taxa. Lastly, metrics and data presentation of ingested plastics are briefly reviewed in the context of seabird studies.
  • OPEN ACCESS
    Muted responses to Ag accumulation by plankton to chronic and pulse exposure to silver nanoparticles in a boreal lake
    FACETS • Vol. 4 • No. 1 • pp. 566 - 583
    Silver nanoparticles (AgNPs) are an emerging class of contaminants with the potential to impact ecosystem structure and function. AgNPs are antimicrobial, suggesting that microbe-driven ecosystem functions may be particularly vulnerable to AgNP exposure. Predicting the environmental impacts of AgNPs requires in situ investigation of environmentally relevant dosing regimens over time scales that allow for ecosystem-level responses. We used 3000 L enclosures installed in a boreal lake to expose plankton communities to chronic and pulse AgNP dosing regimens with concentrations mimicking those recorded in natural waters. We compared temporal patterns of plankton responses, Ag accumulation, and ecosystem metabolism (i.e., daily ecosystem respiration, gross primary production, and net ecosystem production) for 6 weeks of chronic dosing and 3 weeks following a pulsed dose. Ag accumulated in microplankton and zooplankton, but carbon-specific Ag was nonlinear over time and generally did not predict plankton response. Ecosystem metabolism did not respond to either AgNP exposure type. This lack of response corresponded with weak microplankton responses in the chronic treatments but did not reflect the stronger microplankton response in the pulse treatment. Our results suggest that lake ecosystem metabolism is somewhat resistant to environmentally relevant concentrations of AgNPs and that organismal responses do not necessarily predict ecosystem-level responses.
  • OPEN ACCESS
    Exploring community-based marine aquaculture as a coastal resource management opportunity in Nova Scotia, Canada
    FACETS • Vol. 5 • No. 1 • pp. 26 - 48
    Aquaculture is one of the world’s fastest growing food production sectors and presents an opportunity for rural community development that can support coastal livelihoods. An ecosystem approach to aquaculture (EAA) has been recommended to facilitate socially and environmentally sustainable development, yet there remains a need to better involve people in planning and operational aspects. Community-based management may help to implement principles of the EAA; however, context-specific research is needed to understand its potential application and suitability. This research explores opportunities for community-based marine aquaculture (CBMA) for nonfinfish in the context of Nova Scotia, Canada, through a series of stakeholder interviews. Results suggest that all stakeholder groups interviewed were positive about the potential for CBMA to support sustainable aquaculture growth in the province; however, key questions around operationalizing CBMA remain. The aquaculture industry is on a continual path for growth worldwide and, therefore, it becomes increasingly important to proactively examine strategies such as CBMA that can help to facilitate EAA in a way that genuinely puts people at the centre of aquaculture development and governance.
  • OPEN ACCESS
    The effects of hydrogen peroxide on mortality, escape response, and oxygen consumption of Calanus spp.
    FACETS • Vol. 4 • No. 1 • pp. 626 - 637
    Hydrogen peroxide (H2O2), a pesticide used in salmonid aquaculture, is released directly into the environment where nontarget organisms are at risk of exposure. We determined threshold concentrations for mortality of Calanus spp., the dominant zooplankton species in the North Atlantic, and assessed sublethal effects, focusing on the escape response and oxygen consumption rates (OCRs) as behavioral and physiological assays. One-hour exposure to 170 mg·L−1 (i.e., 10% of the recommended H2O2 treatment) was lethal to copepodite stage V (92% mortality) and adult females (100% mortality). The acute median lethal concentration (1h-LC50) was 214.1 (150.67–277.4) and 48.6 (44.9–52.2) mg·L−1 for copepodite V and adults, respectively. The 25-h LC50 was 77.1 (57.9–96.2) and 30.63 (25.4–35.8) mg·L−1 for copepodite V and adults, respectively. At concentrations of 0.5% and 1% of the recommended treatment level, Calanus spp. showed a decrease in escape performance and lower OCRs with increased concentration. At H2O2 concentrations of 5% of the recommended treatment levels (85 mg·L−1), exposed copepods showed no escape reaction response. These results suggest that sublethal concentrations of H2O2 will increase the risk of predation for Calanus spp. Furthermore, this study provides supporting evidence that theoretical “safe” values, traditionally used for predicting toxicity thresholds, underestimate the impact of H2O2 on the physiological condition of nontarget crustaceans.
  • OPEN ACCESS
    Correction: Impacts of hypoxia on estuarine macroinvertebrate assemblages across a regional nutrient gradient
    FACETS • Vol. 4 • No. 1 • pp. 161
  • OPEN ACCESS
    Differing marine animal biomass shifts under 21st century climate change between Canada’s three oceans
    FACETS • Vol. 5 • No. 1 • pp. 105 - 122
    Under climate change, species composition and abundances in high-latitude waters are expected to substantially reconfigure with consequences for trophic relationships and ecosystem services. Outcomes are challenging to project at national scales, despite their importance for management decisions. Using an ensemble of six global marine ecosystem models we analyzed marine ecosystem responses to climate change from 1971 to 2099 in Canada’s Exclusive Economic Zone (EEZ) under four standardized emissions scenarios. By 2099, under business-as-usual emissions (RCP8.5) projected marine animal biomass declined by an average of −7.7% (±29.5%) within the Canadian EEZ, dominated by declines in the Pacific (−24% ± 24.5%) and Atlantic (−25.5% ± 9.5%) areas; these were partially compensated by increases in the Canadian Arctic (+26.2% ± 38.4%). Lower emissions scenarios projected successively smaller biomass changes, highlighting the benefits of stronger mitigation targets. Individual model projections were most consistent in the Atlantic and Pacific, but highly variable in the Arctic due to model uncertainties in polar regions. Different trajectories of future marine biomass changes will require regional-specific responses in conservation and management strategies, such as adaptive planning of marine protected areas and species-specific management plans, to enhance resilience and rebuilding of Canada’s marine ecosystems and commercial fish stocks.
  • OPEN ACCESS
    A first assessment of microplastics and other anthropogenic particles in Hudson Bay and the surrounding eastern Canadian Arctic waters of Nunavut
    FACETS • Vol. 5 • No. 1 • pp. 432 - 454
    Microplastics are a globally ubiquitous contaminant, invading the most remote regions, including the Arctic. To date, our understanding of the distribution and sources of microplastics in the Arctic is limited but growing. This study aims to advance our understanding of microplastics in the Arctic. Surface water, zooplankton, sediment, and snow samples were collected from Hudson Bay to north Baffin Bay onboard the CCGS Amundsen from July to August 2017. Samples were examined for microplastics, which were chemically identified via Raman spectroscopy for surface water and zooplankton and Fourier transform infrared spectroscopy for sediment. We found that 90% of surface water and zooplankton samples, and 85% of sediment samples, contained microplastics or other anthropogenic particles. Mean anthropogenic particle concentrations, which includes microplastics, were 0.22 ± 0.23 (per litre) for surface water, 3.51 ± 4.00 (per gram) for zooplankton, and 1.94 ± 4.12 (per gram) for sediment. These concentrations were not related to the human populations upstream, suggesting that microplastic contamination in the Arctic is from long-range transport. Overall, this study highlights the presence of microplastics across the eastern Canadian Arctic, in multiple media, and offers evidence of long-range transport via ocean and atmospheric currents. Further research is needed to better understand sources, distribution, and effects to Arctic ecosystems.
  • OPEN ACCESS
    Can the toxicity of naphthenic acids in oil sands process-affected water be mitigated by a green photocatalytic method?
    FACETS • Vol. 5 • No. 1 • pp. 474 - 487
    Our study evaluates the efficacy of a “green” (i.e., sustainable, recyclable, and reusable) technology to treat waste waters produced by Canada’s oil sands industry. We examined the ability of a novel advanced oxidative method—ultra-violet photocatalysis over titanium dioxide (TiO2)-coated microparticles—to reduce the toxicity of naphthenic acid fraction components (NAFC) to early life stages of the fathead minnow (Pimephales promelas). Lengthening the duration of photocatalysis resulted in greater removal of NAFC from bioassay exposure waters; low- and high-intensity treatments reduced NAFC concentrations to about 20 and 3 mg/L (by Fourier-transformed infrared spectroscopy, FTIR), respectively. Treatments reduced the acute lethality of NAFC to fathead minnows by over half after low-intensity treatment and three-fold after high-intensity treatment. However, incomplete degradation in low-intensity treatments increased the incidence of chronic toxicity relative to untreated NAFC solutions and cardiovascular abnormalities were common even with >80% of NAFC degraded. Our findings demonstrate that photocatalysis over TiO2 microparticles is a promising method for mitigating the toxicity of oil sands process-affected water-derived NAFC to fish native to the oil sands region, but the intensity of the photocatalytic treatment needs to be considered carefully to ensure adequate mineralization of toxic constituents.